MODi: a powerful and convenient web server for identifying multiple post-translational peptide modifications from tandem mass spectra (Q34974171)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16845006%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

title

MODi: a powerful and convenient web server for identifying multiple post-translational peptide modifications from tandem mass spectra (English)

1 reference

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27 December 2019

1 reference

2

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27 December 2019

Kong-joo Lee

9

1 reference

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27 December 2019

10

Eunok Paek

1 reference

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27 December 2019

author name string

Sangtae Kim

1

1 reference

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27 December 2019

Ji Woong Sim

3

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27 December 2019

Heejin Park

4

1 reference

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27 December 2019

Jaeho Jeong

5

1 reference

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27 December 2019

Hokeun Kim

6

1 reference

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27 December 2019

Younghwan Seo

7

1 reference

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27 December 2019

Jawon Seo

8

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27 December 2019

language of work or name

English

0 references

publication date

1 July 2006

1 reference

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27 December 2019

published in

Nucleic Acids Research

1 reference

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27 December 2019

volume

34

1 reference

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27 December 2019

issue

Web Server issue

1 reference

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27 December 2019

page(s)

W258-63

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

27 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

Identification of post-translational modifications by blind search of mass spectra.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

PepNovo: de novo peptide sequencing via probabilistic network modeling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

Modification-specific proteomics: characterization of post-translational modifications by mass spectrometry.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

Post-translational modifications and their biological functions: proteomic analysis and systematic approaches

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

A major step on the road to understanding a unique posttranslational modification and its role in a genetic disease

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

Mass spectrometry-based proteomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

Proteomic analysis of post-translational modifications

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

SCOPE: a probabilistic model for scoring tandem mass spectra against a peptide database.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

Probability-based protein identification by searching sequence databases using mass spectrometry data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

High-throughput mass spectrometric discovery of protein post-translational modifications.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

Error-tolerant identification of peptides in sequence databases by peptide sequence tags

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

Database-independent, database-dependent, and extended interpretation of peptide mass spectra in VEMS V2.0.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

GutenTag: high-throughput sequence tagging via an empirically derived fragmentation model

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538808

A method for reducing the time required to match protein sequences with tandem mass spectra

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16845006

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKL245

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16845006%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/KimNSPJKSSLP06

27 December 2019

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16845006%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

PubMed publication ID

16845006

1 reference