Dependence of proteasome processing rate on substrate unfolding (Q34978877)

5 August 2017

title

Dependence of proteasome processing rate on substrate unfolding (English)

1 reference

5 August 2017

Allen Henderson

1

1 reference

5 August 2017

Jenny Erales

series ordinal

2

1 reference

5 August 2017

Martin A Hoyt

series ordinal

3

1 reference

5 August 2017

Philip Coffino

series ordinal

4

1 reference

5 August 2017

language of work or name

English

0 references

publication date

28 March 2011

1 reference

Journal of Biological Chemistry

5 August 2017

published in

1 reference

5 August 2017

volume

286

1 reference

5 August 2017

issue

20

1 reference

5 August 2017

page(s)

17495-17502

1 reference

ATP-dependent steps in the binding of ubiquitin conjugates to the 26S proteasome that commit to degradation

5 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Single-molecule denaturation and degradation of proteins by the AAA+ ClpXP protease

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Subcomplexes of PA700, the 19 S regulator of the 26 S proteasome, reveal relative roles of AAA subunits in 26 S proteasome assembly and activation and ATPase activity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Recognition and processing of ubiquitin-protein conjugates by the proteasome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

ATP-dependent proteases differ substantially in their ability to unfold globular proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Engineering proteins with tailored nanomechanical properties: a single molecule approach.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Proteasome substrate degradation requires association plus extended peptide

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Glycine-alanine repeats impair proper substrate unfolding by the proteasome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Ligand binding modulates the mechanical stability of dihydrofolate reductase.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

ATP hydrolysis-dependent disassembly of the 26S proteasome is part of the catalytic cycle

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Partitioning between unfolding and release of native domains during ClpXP degradation determines substrate selectivity and partial processing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Ubiquitin-free routes into the proteasome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Keepers at the final gates: regulatory complexes and gating of the proteasome channel.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Rad23 and Rpn10 serve as alternative ubiquitin receptors for the proteasome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Sem1p is a novel subunit of the 26 S proteasome from Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Proteasomes and their kin: proteases in the machine age

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Repeat sequence of Epstein-Barr virus-encoded nuclear antigen 1 protein interrupts proteasome substrate processing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Structural elements of antizymes 1 and 2 are required for proteasomal degradation of ornithine decarboxylase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Mechanical unfolding of a titin Ig domain: structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

A proteasomal ATPase subunit recognizes the polyubiquitin degradation signal

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Effects of protein stability and structure on substrate processing by the ClpXP unfolding and degradation machine

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Mapping the folding pathway of an immunoglobulin domain: structural detail from Phi value analysis and movement of the transition state

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

A gated channel into the proteasome core particle

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Proteasomal proteomics: identification of nucleotide-sensitive proteasome-interacting proteins by mass spectrometric analysis of affinity-purified proteasomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Unfolding and internalization of proteins by the ATP-dependent proteases ClpXP and ClpAP.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Protein binding and unfolding by the chaperone ClpA and degradation by the protease ClpAP.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Import of a cytosolic protein into lysosomes by chaperone-mediated autophagy depends on its folding state

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

A proteasome howdunit: the case of the missing signal

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Atomic force microscopy reveals the mechanical design of a modular protein.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Recognition of the polyubiquitin proteolytic signal

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Epoxomicin, a potent and selective proteasome inhibitor, exhibits in vivo antiinflammatory activity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Multiubiquitin chain binding and protein degradation are mediated by distinct domains within the 26 S proteasome subunit Mcb1.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

The multiubiquitin-chain-binding protein Mcb1 is a component of the 26S proteasome in Saccharomyces cerevisiae and plays a nonessential, substrate-specific role in protein turnover.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Ability of methotrexate to inhibit translocation to the cytosol of dihydrofolate reductase fused to diphtheria toxin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

A 26 S protease subunit that binds ubiquitin conjugates

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Prevention of rapid intracellular degradation of ODC by a carboxyl-terminal truncation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Ornithine decarboxylase is degraded by the 26S proteasome without ubiquitination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3093823

Proteasomes begin ornithine decarboxylase digestion at the C terminus

8 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

Methotrexate inhibits proteolysis of dihydrofolate reductase by the N-end rule pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

ATP-dependent proteases degrade their substrates by processively unraveling them from the degradation signal

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

Ubiquitin-independent mechanisms of mouse ornithine decarboxylase degradation are conserved between mammalian and fungal cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

Characterization of the proteasome using native gel electrophoresis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

An unstructured initiation site is required for efficient proteasome-mediated degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

Structural elements of the ubiquitin-independent proteasome degron of ornithine decarboxylase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

Binding of a specific ligand inhibits import of a purified precursor protein into mitochondria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

Dynamics of substrate denaturation and translocation by the ClpXP degradation machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

Linkage between ATP consumption and mechanical unfolding during the protein processing reactions of an AAA+ degradation machine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

NF-κB p105 Processing via the Ubiquitin-Proteasome Pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.212027

Coupled assay of Na+,K+-ATPase activity

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21454622

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Nucleotidase activities of the 26 S proteasome and its regulatory complex

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21454622

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Point mutations alter the mechanical stability of immunoglobulin modules

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21454622

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M110.212027

1 reference

5 August 2017

1 reference

5 August 2017

1 reference