Chikungunya virus 3' untranslated region: adaptation to mosquitoes and a population bottleneck as major evolutionary forces (Q34979371)

5 August 2017

Chikungunya virus 3' untranslated region: adaptation to mosquitoes and a population bottleneck as major evolutionary forces (English)

1 reference

5 August 2017

0 references

1 reference

4

Scott C Weaver

0 references

Konstantin A. Tsetsarkin

series ordinal

3

object named as

Konstantin A Tsetsarkin

1 reference

5 August 2017

1

Rubing Chen

1 reference

5 August 2017

Eryu Wang

2

1 reference

5 August 2017

29 August 2013

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5 August 2017

1 reference

5 August 2017

9

1 reference

5 August 2017

e1003591

1 reference

5 August 2017

8

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Creative Commons Attribution 4.0 International

5 August 2017

start time

29 August 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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8 July 2018

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8 July 2018

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West Nile virus noncoding subgenomic RNA contributes to viral evasion of the type I interferon-mediated antiviral response

8 July 2018

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8 July 2018

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West Nile virus encodes a microRNA-like small RNA in the 3' untranslated region which up-regulates GATA4 mRNA and facilitates virus replication in mosquito cells

8 July 2018

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8 July 2018

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Chikungunya virus emergence is constrained in Asia by lineage-specific adaptive landscapes

8 July 2018

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Mosquito RNAi is the major innate immune pathway controlling arbovirus infection and transmission

8 July 2018

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Functional interaction between cellular p100 and the dengue virus 3' UTR.

8 July 2018

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An RNA pseudoknot is required for production of yellow fever virus subgenomic RNA by the host nuclease XRN1

8 July 2018

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RNA structures required for production of subgenomic flavivirus RNA

8 July 2018

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Sindbis virus usurps the cellular HuR protein to stabilize its transcripts and promote productive infections in mammalian and mosquito cells

8 July 2018

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Genome-scale phylogenetic analyses of chikungunya virus reveal independent emergences of recent epidemics and various evolutionary rates

8 July 2018

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Re-emergence of Chikungunya virus in South-east Asia: virological evidence from Sri Lanka and Singapore

8 July 2018

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Characterization of untranslated regions of the salmonid alphavirus 3 (SAV3) genome and construction of a SAV3 based replicon

8 July 2018

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Multiple alignment of DNA sequences with MAFFT

8 July 2018

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PseudoViewer3: generating planar drawings of large-scale RNA structures with pseudoknots

8 July 2018

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Every microsatellite is different: Intrinsic DNA features dictate mutagenesis of common microsatellites present in the human genome

8 July 2018

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A Highly Structured, Nuclease-Resistant, Noncoding RNA Produced by Flaviviruses Is Required for Pathogenicity

8 July 2018

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RNAalifold: improved consensus structure prediction for RNA alignments

8 July 2018

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A single mutation in chikungunya virus affects vector specificity and epidemic potential

8 July 2018

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The 3' untranslated region of sindbis virus represses deadenylation of viral transcripts in mosquito and Mammalian cells

8 July 2018

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A single positively selected West Nile viral mutation confers increased virogenesis in American crows

8 July 2018

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Origin and evolution of 3'UTR of flaviviruses: long direct repeats as a basis for the formation of secondary structures and their significance for virus transmission

8 July 2018

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Infectious clones of Chikungunya virus (La Réunion isolate) for vector competence studies

8 July 2018

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Direct repeats in the 3' untranslated regions of mosquito-borne flaviviruses: possible implications for virus transmission.

8 July 2018

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The 3' untranslated region of tick-borne flaviviruses originated by the duplication of long repeat sequences within the open reading frame

8 July 2018

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Requirements at the 3' end of the sindbis virus genome for efficient synthesis of minus-strand RNA

8 July 2018

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Size heterogeneity in the 3' noncoding region of South American isolates of yellow fever virus

8 July 2018

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Functional Analysis of Mosquito-Borne Flavivirus Conserved Sequence Elements within 3' Untranslated Region of West Nile Virus by Use of a Reporting Replicon That Differentiates between Viral Translation and RNA Replication

8 July 2018

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8 July 2018

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A stable full-length yellow fever virus cDNA clone and the role of conserved RNA elements in flavivirus replication

8 July 2018

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Secondary structure prediction for aligned RNA sequences

8 July 2018

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Comparison of two aquatic alphaviruses, salmon pancreas disease virus and sleeping disease virus, by using genome sequence analysis, monoclonal reactivity, and cross-infection

8 July 2018

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A live attenuated recombinant dengue-4 virus vaccine candidate with restricted capacity for dissemination in mosquitoes and lack of transmission from vaccinees to mosquitoes.

8 July 2018

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Sylvatic transmission of arboviruses among Bornean orangutans

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Essential role of cyclization sequences in flavivirus RNA replication

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Alphavirus RNA genome repair and evolution: molecular characterization of infectious sindbis virus isolates lacking a known conserved motif at the 3' end of the genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Biological consequences of deletions within the 3'-untranslated region of flaviviruses may be due to rearrangements of RNA secondary structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

MODELTEST: testing the model of DNA substitution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Spontaneous and engineered deletions in the 3' noncoding region of tick-borne encephalitis virus: construction of highly attenuated mutants of a flavivirus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Secondary structure of the 3'-untranslated region of yellow fever virus: implications for virulence, attenuation and vaccine development

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Secondary structure of the 3' untranslated region of flaviviruses: similarities and differences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Dengue type 4 virus mutants containing deletions in the 3' noncoding region of the RNA genome: analysis of growth restriction in cell culture and altered viremia pattern and immunogenicity in rhesus monkeys

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Multiple binding sites for cellular proteins in the 3' end of Sindbis alphavirus minus-sense RNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

An APL-programmed genetic algorithm for the prediction of RNA secondary structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

History of Aedes aegypti eradication in the Americas

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Malaria and the work of WHO

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Mutagenesis of the 3' nontranslated region of Sindbis virus RNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Attenuation of Sindbis virus neurovirulence by using defined mutations in nontranslated regions of the genome RNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

The 3′-non-coding regions of alpharivus RNAs contain repeating sequences

8 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003591

The alphavirus 3'-nontranslated region: size heterogeneity and arrangement of repeated sequence elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003591

Personal experiences in the malaria eradication campaign 1955-1962.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003591

Origin and evolution of flavivirus 5'UTRs and panhandles: trans-terminal duplications?

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003591

The 3' untranslated regions of Kamiti River virus and Cell fusing agent virus originated by self-duplication

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003591

An animal model for studying the pathogenesis of chikungunya virus infection

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3757053

Identification of viral microRNAs

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24009512

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PPAT.1003591

1 reference

5 August 2017

1 reference

5 August 2017

1 reference

PubMed ID

24009512