A quantitative model of error accumulation during PCR amplification (Q34984902)

5 August 2017

title

A quantitative model of error accumulation during PCR amplification (English)

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5 August 2017

E Pienaar

1

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5 August 2017

M Theron

series ordinal

2

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5 August 2017

M Nelson

series ordinal

3

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5 August 2017

H J Viljoen

series ordinal

4

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5 August 2017

publication date

10 January 2006

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Computational Biology and Chemistry

5 August 2017

published in

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5 August 2017

volume

30

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5 August 2017

issue

2

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5 August 2017

page(s)

102-111

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maintained by WikiProject

5 August 2017

WikiProject Mathematics

0 references

cites work

Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Two-step total gene synthesis method

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Construction of long DNA molecules using long PCR-based fusion of several fragments simultaneously

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Generating a synthetic genome by whole genome assembly: phiX174 bacteriophage from synthetic oligonucleotides

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Thermodynamically balanced inside-out (TBIO) PCR-based gene synthesis: a novel method of primer design for high-fidelity assembly of longer gene sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Recent aspects of oxidative DNA damage: guanine lesions, measurement and substrate specificity of DNA repair glycosylases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Getting a grip: polymerases and their substrate complexes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

PCR fidelity of pfu DNA polymerase and other thermostable DNA polymerases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Conformational coupling in DNA polymerase fidelity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Single-step assembly of a gene and entire plasmid from large numbers of oligodeoxyribonucleotides

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Rate of depurination of native deoxyribonucleic acid

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Guanine modification during chemical DNA synthesis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Alternative to the steady-state method: derivation of reaction rates from first-passage times and pathway probabilities

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

DNA sequencing with Thermus aquaticus DNA polymerase and direct sequencing of polymerase chain reaction-amplified DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Rapid generation of DNA fragments by PCR amplification of crude, synthetic oligonucleotides

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Construction of synthetic genes using PCR after automated DNA synthesis of their entire top and bottom strands

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Total synthesis of a gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

PCR: replicating success.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Effect of DNA damage on PCR amplification efficiency with the relative threshold cycle method

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Principles of rapid polymerase chain reactions: mathematical modeling and experimental verification.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Cytosine deamination plays a primary role in the evolution of mammalian isochores

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544370

Simplification of the empirical relationship between melting temperature of DNA, its GC content and concentration of sodium ions in solution

26 October 2018

1 reference

12 December 2020

Stability of RNA hairpin loops: A6-Cm-U6

1 reference

12 December 2020

Heat-induced deamination of cytosine residues in deoxyribonucleic acid

1 reference

12 December 2020

Minimizing the time required for DNA amplification by efficient heat transfer to small samples

1 reference

12 December 2020

Optimized gene synthesis, high level expression, isotopic enrichment, and refolding of human interleukin-5

1 reference

12 December 2020

Characterization and application to hot start PCR of neutralizing monoclonal antibodies against KOD DNA polymerase

1 reference

12 December 2020

THEORY OF THE MELTING TRANSITION OF SYNTHETIC POLYNUCLEOTIDES: EVALUATION OF THE STACKING FREE ENERGY

1 reference

12 December 2020

A macroscopic kinetic model for DNA polymerase elongation and high-fidelity nucleotide selection

1 reference

12 December 2020

10.1016/J.COMPBIOLCHEM.2005.11.002

Identifiers

DOI

1 reference

journals/candc/PienaarTNV06

5 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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5 August 2017

1 reference