Semi-automated curation of metabolic models via flux balance analysis: a case study with Mycoplasma gallisepticum (Q34987962)

5 August 2017

title

Semi-automated curation of metabolic models via flux balance analysis: a case study with Mycoplasma gallisepticum (English)

1 reference

5 August 2017

main subject

Mycoplasma gallisepticum

object named as

Mycoplasma gallisepticum

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Ranjan Srivastava

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

author name string

Joseph Zinski

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Steven M Szczepanek

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Erik L Johnson

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Edan R Tulman

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Wei-Mei Ching

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Steven J Geary

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

publication date

5 September 2013

1 reference

PLOS Computational Biology

5 August 2017

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

issue

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

page(s)

e1003208

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons CC0 License

13 June 2020

copyright license

start time

5 September 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Sodium and proton transport in Mycoplasma gallisepticum

8 July 2018

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Cell volume regulation in Mycoplasma gallisepticum

8 July 2018

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Interaction of albumin and phospholipid:cholesterol liposomes in growth of Mycoplasma spp

8 July 2018

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Characterization and solubilization of the membrane-bound ATPase of Mycoplasma gallisepticum

8 July 2018

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Synthesis of deoxyribomononucleotides in Mollicutes: dependence on deoxyribose-1-phosphate and PPi.

8 July 2018

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Role of Na+ cycle in cell volume regulation of Mycoplasma gallisepticum

8 July 2018

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Volume regulation in Mycoplasma gallisepticum: evidence that Na+ is extruded via a primary Na+ pump

8 July 2018

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Antiphospholipid antibodies and Mycoplasma pneumoniae infection

8 July 2018

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Serine hydroxymethyltransferase catalyzes the hydrolysis of 5,10-methenyltetrahydrofolate to 5-formyltetrahydrofolate

8 July 2018

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Network analysis of intermediary metabolism using linear optimization. I. Development of mathematical formalism

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764002

Differences in incorporation of nucleic acid bases and nucleosides by various Mycoplasma and Acholeplasma species

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764002

Lipid distribution in Acholeplasma laidlawii membrane. A study using the lactoperoxidase-mediated iodination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764002

Membrane lipids of Mycoplasma gallisepticum: a disaturated phosphatidylcholine and a phosphatidylglycerol with an unusual positional distribution of fatty acids

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764002

Antibiotic overproduction in Streptomyces coelicolor A3 2 mediated by phosphofructokinase deletion

8 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

In silico design and adaptive evolution of Escherichia coli for production of lactic acid.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Design and application of genome-scale reconstructed metabolic models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Optimization based automated curation of metabolic reconstructions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Filling gaps in a metabolic network using expression information

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Impact of genome reduction on bacterial metabolism and its regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Accumulation of a potent gammadelta T-cell stimulator after deletion of the lytB gene in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

The herbicide ketoclomazone inhibits 1-deoxy-D-xylulose 5-phosphate synthase in the 2-C-methyl-D-erythritol 4-phosphate pathway and shows antibacterial activity against Haemophilus influenzae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Phylogenetic relationships among mycoplasmas based on the whole genomic information.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Pyrimidine Deoxyribonucleotide Metabolism in Members of the Class Mollicutes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Distinctions in Mollicutes Purine Metabolism: Pyrophosphate-Dependent Nucleoside Kinase and Dependence on Guanylate Salvage

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Suspected utility of enzymes with multiple activities in the small genome Mycoplasma species: the replacement of the missing "household" nucleoside diphosphate kinase gene and activity by glycolytic kinases

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003208

Combining pathway analysis with flux balance analysis for the comprehensive study of metabolic systems

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764002

CHEMICAL COMPOSITION OF MYCOPLASMA CELLS AND MEMBRANES

26 October 2018

1 reference

12 December 2020

Malate/lactate dehydrogenase in mollicutes: evidence for a multienzyme protein

1 reference

12 December 2020

The cell membrane of mycoplasma

1 reference

12 December 2020

STUDIES ON THE NUTRITION AND GROWTH REQUIREMENTS OF MYCOPLASMA GALLISEPTICUM

1 reference

12 December 2020

Presence of anaplerotic reactions and transamination, and the absence of the tricarboxylic acid cycle in mollicutes

1 reference

12 December 2020

Genome-scale metabolic network analysis and drug targeting of multi-drug resistant pathogen Acinetobacter baumannii AYE

1 reference

12 December 2020

Diversity of energy-yielding substrates and metabolism in avian mycoplasmas

1 reference

12 December 2020

Tissue cultures and mycoplasmas

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.1003208

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/BautistaZSJTCGS13

13 June 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24039564%20AND%20SRC:MED&resulttype=core&format=json