Distinguishing among evolutionary models for the maintenance of gene duplicates (Q34992045)

5 August 2017

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title

Distinguishing among evolutionary models for the maintenance of gene duplicates (English)

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5 August 2017

1

Matthew W Hahn

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PubMed ID

19596713

5 August 2017

language of work or name

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13 July 2009

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5 August 2017

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5 August 2017

100

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5 August 2017

5

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5 August 2017

605-617

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Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

5 August 2017

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Recent segmental duplications in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

An Alu Transposition Model for the Origin and Expansion of Human Segmental Duplications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Segmental duplications: organization and impact within the current human genome project assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Multiple paleopolyploidizations during the evolution of the Compositae reveal parallel patterns of duplicate gene retention after millions of years

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Positive selection driving diversification in plant secondary metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The gene balance hypothesis: from classical genetics to modern genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Duplication of the Ace.1 locus in Culex pipiens mosquitoes from the Caribbean

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Retroposons--seeds of evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Birth and adaptive evolution of a hominoid gene that supports high neurotransmitter flux

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Complex genomic rearrangements lead to novel primate gene function

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Molecular evolution of a duplication: the sex-peptide (Acp70A) gene region of Drosophila subobscura and Drosophila madeirensis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Invasion and maintenance of a gene duplication

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Asymmetric sequence divergence of duplicate genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Turning a hobby into a job: how duplicated genes find new functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Birth of a chimeric primate gene by capture of the transposase gene from a mobile element

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Birth of two chimeric genes in the Hominidae lineage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Functional evolution of the vertebrate Myb gene family: B-Myb, but neither A-Myb nor c-Myb, complements Drosophila Myb in hemocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The evolution of mammalian gene families

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Differential selection after duplication in mammalian developmental genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A role for reverse transcripts in gene conversion

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A novel hybrid open reading frame formed by multiple cellular gene transductions by a plant long terminal repeat retroelement

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A model of segmental duplication formation in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Two patterns of genome organization in mammals: the chromosomal distribution of duplicate genes in human and mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Darwinian evolution in the genealogy of haemoglobin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Accelerated rate of gene gain and loss in primates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Gene family evolution across 12 Drosophila genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Potential for selection among nearly neutral allozymes of 6-phosphogluconate dehydrogenase in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A cytoplasmic male sterility-associated mitochondrial protein causes pollen disruption in transgenic tobacco

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Evolutionary rate analyses of orthologs and paralogs from 12 Drosophila genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Gene duplication and the adaptive evolution of a classic genetic switch

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Molecular evolution and population genetics of duplicated accessory gland protein genes in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The evolution of functionally novel proteins after gene duplication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Divergence of spatial gene expression profiles following species-specific gene duplications in human and mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Enzyme recruitment in evolution of new function

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Parallel evolution of chimeric fusion genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Origin and evolution of a chimeric fusion gene in Drosophila subobscura, D. madeirensis and D. guanche

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Mapping and sequencing of structural variation from eight human genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Role of selection in fixation of gene duplications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Selection in the evolution of gene duplications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Independent duplications of the acetylcholinesterase gene conferring insecticide resistance in the mosquito Culex pipiens

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A DNA replication mechanism for generating nonrecurrent rearrangements associated with genomic disorders

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Human subtelomeres are hot spots of interchromosomal recombination and segmental duplication

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The origin of new genes: glimpses from the young and old

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A new function evolved from gene fusion

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The evolutionary fate and consequences of duplicate genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The origins of genome complexity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The altered evolutionary trajectories of gene duplicates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Inventing an arsenal: adaptive evolution and neofunctionalization of snake venom phospholipase A2 genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Modeling gene and genome duplications in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Chorionic gonadotropin has a recent origin within primates and an evolutionary history of selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Population genetics and geographic variation of alcohol dehydrogenase (Adh) paralogs and glucose-6-phosphate dehydrogenase (G6pd) in Drosophila mojavensis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Galactokinase encoded by GAL1 is a bifunctional protein required for induction of the GAL genes in Kluyveromyces lactis and is able to suppress the gal3 phenotype in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The early stages of duplicate gene evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Selective sweep of a newly evolved sperm-specific gene in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A diffusion approach to approximating preservation probabilities for gene duplicates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Quantifying the major mechanisms of recent gene duplications in the human and mouse genomes: a novel strategy to estimate gene duplication rates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Many gene and domain families have convergent fates following independent whole-genome duplication events in Arabidopsis, Oryza, Saccharomyces and Tetraodon

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The Tre2 (USP6) oncogene is a hominoid-specific gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Diet and the evolution of human amylase gene copy number variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Gene sharing by delta-crystallin and argininosuccinate lyase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The recruitment of crystallins: new functions precede gene duplication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

The insertion of two amino acids into a transcriptional inducer converts it into a galactokinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Allelic divergence precedes and promotes gene duplication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Copy correction and concerted evolution in the conservation of yeast genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Subfunctionalization of duplicated genes as a transition state to neofunctionalization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Global variation in copy number in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Convergent neofunctionalization by positive Darwinian selection after ancient recurrent duplications of the xanthine dehydrogenase gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Back to the roots of a new exon--the molecular archaeology of a SP100 splice variant

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Dynamic evolution of the innate immune system in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Segmental duplications and the evolution of the primate genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Large-scale copy number polymorphism in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Preferential subfunctionalization of slow-evolving genes after allopolyploidization in Xenopus laevis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Role of positive selection in the retention of duplicate genes in mammalian genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A roadmap of tandemly arrayed genes in the genomes of human, mouse, and rat.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

On the possibility of constructive neutral evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

21 January 2018

RNA-templated DNA repair

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Selection for more of the same product as a force to enhance concerted evolution of duplicated genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Duplication and divergence: the evolution of new genes and old ideas

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Fusion of the human gene for the polyubiquitination coeffector UEV1 with Kua, a newly identified gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Comparative analysis indicates regulatory neofunctionalization of yeast duplicates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

A novel family of lectins evolutionarily related to class V chitinases: an example of neofunctionalization in legumes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Evolutionary fate of retroposed gene copies in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Origin of sphinx, a young chimeric RNA gene in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Natural history and evolutionary principles of gene duplication in fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

CYP6B1 and CYP6B3 of the black swallowtail (Papilio polyxenes): adaptive evolution through subfunctionalization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

ADAPTIVE EVOLUTION OF PHOTORECEPTORS AND VISUAL PIGMENTS IN VERTEBRATES

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Evolution by gene duplication: an update

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Positive Darwinian selection after gene duplication in primate ribonuclease genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Patterns of nucleotide substitution among simultaneously duplicated gene pairs in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

Different evolutionary patterns between young duplicate genes in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FJHERED%2FESP047

21 January 2018

Identifiers

DOI

10.1093/JHERED/ESP047

1 reference

5 August 2017

1 reference

PubMed ID

19596713