Phosphorylated intrinsically disordered region of FACT masks its nucleosomal DNA binding elements (Q34992426)

5 August 2017

Phosphorylated intrinsically disordered region of FACT masks its nucleosomal DNA binding elements (English)

1 reference

Structure specific recognition protein Dmel_CG4817

5 August 2017

0 references

1 reference

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

author name string

Yasuo Tsunaka

1

1 reference

5 August 2017

Junko Toga

2

1 reference

5 August 2017

Hiroto Yamaguchi

3

1 reference

5 August 2017

Shin-ichi Tate

4

1 reference

5 August 2017

Susumu Hirose

5

1 reference

5 August 2017

Kosuke Morikawa

6

1 reference

5 August 2017

language of work or name

English

0 references

publication date

15 July 2009

1 reference

Journal of Biological Chemistry

5 August 2017

1 reference

5 August 2017

284

1 reference

5 August 2017

36

1 reference

5 August 2017

24610-24621

1 reference

describes a project that uses

5 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2782050/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Visualization of Intrinsically Disordered Regions of Proteins by High-Speed Atomic Force Microscopy

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The FACT Spt16 “peptidase” domain is a histone H3–H4 binding module

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

FACT-mediated exchange of histone variant H2AX regulated by phosphorylation of H2AX and ADP-ribosylation of Spt16.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Phosphoproteomic Analysis of the Mouse Brain Cytosol Reveals a Predominance of Protein Phosphorylation in Regions of Intrinsic Sequence Disorder

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Histone H2A monoubiquitination represses transcription by inhibiting RNA polymerase II transcriptional elongation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Mapping intramolecular interactions between domains in HMGB1 using a tail-truncation approach.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Drosophila GAGA factor directs histone H3.3 replacement that prevents the heterochromatin spreading

8 July 2018

1 reference

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Nucleolin: a multiFACeTed protein.

8 July 2018

1 reference

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Nucleolin is required for RNA polymerase I transcription in vivo

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Functional cooperation between FACT and MCM helicase facilitates initiation of chromatin DNA replication

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

de FACTo nucleosome dynamics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Intrinsic disorder in transcription factors

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

The structure of the yFACT Pob3-M domain, its interaction with the DNA replication factor RPA, and a potential role in nucleosome deposition

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Nucleolin is a histone chaperone with FACT-like activity and assists remodeling of nucleosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Alteration of the nucleosomal DNA path in the crystal structure of a human nucleosome core particle

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Intrinsically unstructured proteins and their functions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

CK2 phosphorylates SSRP1 and inhibits its DNA-binding activity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

The importance of intrinsic disorder for protein phosphorylation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Reconstitution of nucleosome core particles from recombinant histones and DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Chromatin-associated HMGA and HMGB proteins: versatile co-regulators of DNA-dependent processes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Multiple Nhp6 molecules are required to recruit Spt16-Pob3 to form yFACT complexes and to reorganize nucleosomes.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

FACT facilitates transcription-dependent nucleosome alteration

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

The high-mobility-group box protein SSRP1/T160 is essential for cell viability in day 3.5 mouse embryos

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Drosophila FACT contributes to Hox gene expression through physical and functional interactions with GAGA factor

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Extended disordered proteins: targeting function with less scaffold

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Protein kinase CK2 phosphorylates the high mobility group domain protein SSRP1, inducing the recognition of UV-damaged DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

The DNA chaperone HMGB1 facilitates ACF/CHRAC-dependent nucleosome sliding

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

p53 serine 392 phosphorylation increases after UV through induction of the assembly of the CK2.hSPT16.SSRP1 complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

GTOP: a database of protein structures predicted from genome sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Intrinsically disordered protein

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Interaction of FACT, SSRP1, and the high mobility group (HMG) domain of SSRP1 with DNA damaged by the anticancer drug cisplatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

A bipartite yeast SSRP1 analog comprised of Pob3 and Nhp6 proteins modulates transcription

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

HMG1 and 2, and related 'architectural' DNA-binding proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

A DNA damage-induced p53 serine 392 kinase complex contains CK2, hSpt16, and SSRP1

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

POB3 is required for both transcription and replication in the yeast Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Speeding molecular recognition by using the folding funnel: the fly-casting mechanism

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

The high-mobility group protein T160 binds to both linear and cruciform DNA and mediates DNA bending as determined by ring closure.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Crystal structure of the nucleosome core particle at 2.8 A resolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Protein affinity chromatography with purified yeast DNA polymerase alpha detects proteins that bind to DNA polymerase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

Isolation and characterization of human cDNA clones encoding a high mobility group box protein that recognizes structural distortions to DNA caused by binding of the anticancer agent cisplatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2782050

The chromatin-remodeling factor FACT contributes to centromeric heterochromatin independently of RNAi.

8 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.001958

Solution structure of the HMG-box domain in the SSRP1 subunit of FACT.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.001958

The Long Acidic Tail of High Mobility Group Box 1 (HMGB1) Protein Forms an Extended and Flexible Structure That Interacts with Specific Residues within and between the HMG Boxes†

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.001958

Interactions of the basic N-terminal and the acidic C-terminal domains of the maize chromosomal HMGB1 protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.001958

H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.001958

Stimulation of transcription in cultured cells by high mobility group protein 1: essential role of the acidic carboxyl-terminal region

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19605348

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19605348

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M109.001958

1 reference

5 August 2017

1 reference

5 August 2017

1 reference