Collaborative computational project for electron cryo-microscopy. (Q35006826)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25615866%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

title

Collaborative computational project for electron cryo-microscopy (English)

1 reference

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cryogenic electron microscopy

28 February 2020

main subject

0 references

1 reference

1

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28 February 2020

Ardan Patwardhan

3

1 reference

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28 February 2020

Sjors Scheres

4

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28 February 2020

Maya Topf

5

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28 February 2020

author name string

Tom Burnley

2

1 reference

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28 February 2020

Alan Roseman

6

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28 February 2020

Martyn Winn

7

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28 February 2020

publication date

1 January 2015

1 reference

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Acta Crystallographica Section D: Biological Crystallography

28 February 2020

published in

1 reference

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28 February 2020

volume

71

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28 February 2020

issue

Pt 1

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28 February 2020

page(s)

123-126

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A national facility for biological cryo-electron microscopy

28 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Structure of the Yeast Mitochondrial Large Ribosomal Subunit

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Atomic model of the F 420 -reducing [NiFe] hydrogenase by electron cryo-microscopy using a direct electron detector

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Three-dimensional electron crystallography of protein microcrystals

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

RELION: implementation of a Bayesian approach to cryo-EM structure determination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

RIBFIND: a web server for identifying rigid bodies in protein structures and to aid flexible fitting into cryo EM maps

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Outcome of the first electron microscopy validation task force meeting

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Overview of the CCP4 suite and current developments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

EMDataBank.org: unified data resource for CryoEM

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Image processing for electron microscopy single-particle analysis using XMIPP.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Comparative protein structure modeling using Modeller

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Protein structure fitting and refinement guided by cryo-EM density

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

EMAN2: an extensible image processing suite for electron microscopy

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

The CCPN data model for NMR spectroscopy: development of a software pipeline

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

Ximdisp--A visualization tool to aid structure determination from electron microscope images

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

A new generation of the IMAGIC image processing system

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

MRC image processing programs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4304692

The new CCP4 Coordinate Library as a toolkit for the design of coordinate-related applications in protein crystallography.

8 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1107%2FS1399004714018070

FindEM--a fast, efficient program for automatic selection of particles from electron micrographs

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1107%2FS1399004714018070

Scoring functions for cryoEM density fitting.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1107%2FS1399004714018070

10.1107/S1399004714018070

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25615866%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25615866%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

PubMed publication ID

25615866

1 reference