E. coli DNA replication in the absence of free β clamps (Q35007108)

5 August 2017

title

E. coli DNA replication in the absence of free β clamps (English)

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5 August 2017

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Antoine M van Oijen

7

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Nicholas E. Dixon

object named as

Nicholas E Dixon

6

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Slobodan Jergic

4

object named as

Slobodan Jergic

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5 August 2017

3

Joseph J Loparo

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5 August 2017

Nathan A Tanner

1

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5 August 2017

Gökhan Tolun

2

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5 August 2017

Jack D Griffith

5

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5 August 2017

language of work or name

English

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publication date

25 March 2011

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5 August 2017

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5 August 2017

volume

30

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5 August 2017

issue

9

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5 August 2017

page(s)

1830-1840

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Simultaneous single-molecule measurements of phage T7 replisome composition and function reveal the mechanism of polymerase exchange

5 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Single-molecule studies of the replisome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Stoichiometry and architecture of active DNA replication machinery in Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Single-molecule analysis of the Escherichia coli replisome and use of clamps to bypass replication barriers.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Timing, coordination, and rhythm: acrobatics at the DNA replication fork.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Coordinating DNA replication by means of priming loop and differential synthesis rate

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Coupling DNA unwinding activity with primer synthesis in the bacteriophage T4 primosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

The clamp loader assembles the beta clamp onto either a 3' or 5' primer terminus: the underlying basis favoring 3' loading

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Mechanism of polymerase collision release from sliding clamps on the lagging strand.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Single-molecule analysis reveals that the lagging strand increases replisome processivity but slows replication fork progression

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Whither the replisome: emerging perspectives on the dynamic nature of the DNA replication machinery

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

A model for DNA polymerase switching involving a single cleft and the rim of the sliding clamp

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Translesion DNA polymerases remodel the replisome and alter the speed of the replicative helicase.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Real-time single-molecule observation of rolling-circle DNA replication

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Dynamics of DNA replication loops reveal temporal control of lagging-strand synthesis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Single-molecule studies of fork dynamics in Escherichia coli DNA replication

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Structure of a Sliding Clamp on DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Dynamic DNA helicase-DNA polymerase interactions assure processive replication fork movement.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Dynamics of loading the Escherichia coli DNA polymerase processivity clamp

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

DNA primase acts as a molecular brake in DNA replication

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

CELLULAR DNA REPLICASES: Components and Dynamics at the Replication Fork

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Interaction of the beta sliding clamp with MutS, ligase, and DNA polymerase I.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Two distinct triggers for cycling of the lagging strand polymerase at the replication fork

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

The chi psi subunits of DNA polymerase III holoenzyme bind to single-stranded DNA-binding protein (SSB) and facilitate replication of an SSB-coated template

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Clamp loading, unloading and intrinsic stability of the PCNA, beta and gp45 sliding clamps of human, E. coli and T4 replicases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Dynamics of loading the beta sliding clamp of DNA polymerase III onto DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

The interaction between helicase and primase sets the replication fork clock

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Tau protects beta in the leading-strand polymerase complex at the replication fork.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

A molecular switch in a replication machine defined by an internal competition for protein rings

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

An explanation for lagging strand replication: polymerase hopping among DNA sliding clamps.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Size classes of products synthesized processively by DNA polymerase III and DNA polymerase III holoenzyme of Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

The dnaN gene codes for the beta subunit of DNA polymerase III holoenzyme of escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Accessory proteins bind a primed template and mediate rapid cycling of DNA polymerase III holoenzyme from Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Formation of rolling-circle molecules during phi X174 complementary strand DNA replication

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

The polymerase subunit of DNA polymerase III of Escherichia coli. I. Amplification of the dnaE gene product and polymerase activity of the alpha subunit.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

DNA polymerase III of Escherichia coli. Purification and identification of subunits

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

DNA polymerase III holoenzyme of Escherichia coli. Purification and resolution into subunits

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Electron microscope visualization of chromatin and other DNA-protein complexes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Lagging strand synthesis in coordinated DNA synthesis by bacteriophage t7 replication proteins

8 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.84

Characterization of a triple DNA polymerase replisome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.84

Functional uncoupling of twin polymerases: mechanism of polymerase dissociation from a lagging-strand block.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.84

p53 Monitors replication fork regression by binding to "chickenfoot" intermediates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.84

Replisome assembly reveals the basis for asymmetric function in leading and lagging strand replication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.84

Assembly of a chromosomal replication machine: two DNA polymerases, a clamp loader, and sliding clamps in one holoenzyme particle. I. Organization of the clamp loader

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101994

Coordinated leading- and lagging-strand synthesis at the Escherichia coli DNA replication fork. V. Primase action regulates the cycle of Okazaki fragment synthesis

26 October 2018

1 reference

12 December 2020

Analysis of the Okazaki fragment distributions along single long DNAs replicated by the bacteriophage T4 proteins

1 reference

12 December 2020

Architecture of the replication complex and DNA loops at the fork generated by the bacteriophage t4 proteins

1 reference

12 December 2020

The delta subunit of DNA polymerase III holoenzyme serves as a sliding clamp unloader in Escherichia coli

1 reference

12 December 2020

Direct restart of a replication fork stalled by a head-on RNA polymerase

1 reference

12 December 2020

Visualizing DNA replication at the single-molecule level

1 reference

12 December 2020

Identifiers

DOI

10.1038/EMBOJ.2011.84

1 reference

5 August 2017

1 reference

5 August 2017

1 reference