Signatures of demographic history and natural selection in the human major histocompatibility complex Loci. (Q35038433)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16702436%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

title

Signatures of demographic history and natural selection in the human major histocompatibility complex Loci (English)

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21 January 2020

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3

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21 January 2020

5

Glenys Thomson

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21 January 2020

2

Richard M Single

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21 January 2020

4

Henry A Erlich

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21 January 2020

author name string

Diogo Meyer

series ordinal

1

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21 January 2020

language of work or name

English

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publication date

15 May 2006

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21 January 2020

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21 January 2020

volume

173

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21 January 2020

page(s)

2121-2142

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21 January 2020

issue

4

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Estimation of the coancestry coefficient: basis for a short-term genetic distance

21 January 2020

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8 July 2018

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Natural selection and molecular evolution in PTC, a bitter-taste receptor gene

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Genetic structure of human populations

8 July 2018

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Evidence for population growth in humans is confounded by fine-scale population structure

8 July 2018

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High-resolution patterns of meiotic recombination across the human major histocompatibility complex

8 July 2018

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Molecular evolution of FOXP2, a gene involved in speech and language

8 July 2018

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A strong signature of balancing selection in the 5' cis-regulatory region of CCR5.

8 July 2018

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H UMAN M IGRATIONS AND P OPULATION S TRUCTURE : What We Know and Why it Matters

8 July 2018

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A human genome diversity cell line panel

8 July 2018

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The discovery of single-nucleotide polymorphisms--and inferences about human demographic history

8 July 2018

1 reference

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Statistical tests of selective neutrality in the age of genomics

8 July 2018

1 reference

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Gene conversion and different population histories may explain the contrast between polymorphism and linkage disequilibrium levels

8 July 2018

1 reference

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Excess of rare amino acid polymorphisms in the Toll-like receptor 4 in humans

8 July 2018

1 reference

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Effects of ascertainment bias on recovering human demographic history.

8 July 2018

1 reference

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How selection shapes variation of the human major histocompatibility complex: a review

8 July 2018

1 reference

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Worldwide genetic analysis of the CFTR region

8 July 2018

1 reference

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A method for estimating the intensity of overdominant selection from the distribution of allele frequencies

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Common chimpanzees have greater diversity than humans at two of the three highly polymorphic MHC class I genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Haplotypes and linkage disequilibrium at the phenylalanine hydroxylase locus, PAH, in a global representation of populations

8 July 2018

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Balancing selection at closely linked, overdominant loci in a finite population

8 July 2018

1 reference

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Locus and population specific evolution in HLA class II genes.

8 July 2018

1 reference

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A linkage disequilibrium map of the MHC region based on the analysis of 14 loci haplotypes in 50 French families.

8 July 2018

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Complete sequence and gene map of a human major histocompatibility complex. The MHC sequencing consortium

8 July 2018

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A scan for linkage disequilibrium across the human genome.

8 July 2018

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Balancing selection and MHC.

8 July 2018

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Evolution of HLA class II molecules: Allelic and amino acid site variability across populations

8 July 2018

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HLA and HIV-1: heterozygote advantage and B*35-Cw*04 disadvantage

8 July 2018

1 reference

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Constrained disequilibrium values and hitchhiking in a three-locus system

8 July 2018

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The neutral theory and natural selection in the HLA region.

8 July 2018

1 reference

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Episodic evolution and turnover of HLA-B in the indigenous human populations of the Americas

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

A generic estimation of population subdivision using distances between alleles with special reference for microsatellite loci

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Ascertainment bias in estimates of average heterozygosity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Testing for linkage disequilibrium in genotypic data using the Expectation-Maximization algorithm

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Intensity of natural selection at the major histocompatibility complex loci.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Evidence for balancing selection at HLA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

The sampling theory of selectively neutral alleles

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

The homozygosity test after a change in population size

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Gametic disequilibrium measures: proceed with caution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Disequilibrium pattern analysis. I. Theory

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

A two-locus neutrality test: applications to humans, E. coli and lodgepole pine

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Disequilibrium pattern analysis. II. Application to Danish HLA A and B locus data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection

8 July 2018

1 reference

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Why is the cystic fibrosis gene so frequent?

8 July 2018

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Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Alternative fitness models with the same allele frequency dynamics.

8 July 2018

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Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Drift, admixture, and selection in human evolution: a study with DNA polymorphisms

8 July 2018

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Selection, hitchhiking and disequilibrium analysis at three linked loci with application to HLA data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1569707

Three-locus systems impose additional constraints on pairwise disequilibria

8 July 2018

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Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data

8 July 2018

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Performing the exact test of Hardy-Weinberg proportion for multiple alleles

8 July 2018

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Selection in complex genetic systems III. An effect of allele multiplicity with two loci

8 July 2018

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Enhanced immunological surveillance in mice heterozygous at the H-2 gene complex

8 July 2018

1 reference

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The homozygosity test of neutrality.

8 July 2018

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The immunogenetics of human infectious diseases.

25 October 2018

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Pathogen-Driven Selection and Worldwide HLA Class I Diversity

25 October 2018

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Pathogen resistance and genetic variation at MHC loci

25 October 2018

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12 December 2020

Natural selection at major histocompatibility complex loci of vertebrates

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An exact test for neutrality based on the Ewens sampling distribution

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Comparative evolutionary rates of introns and exons in murine rodents

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12 December 2020

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Identifiers

DOI

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16702436%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16702436%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

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