The abundance of the spliceosomal snRNPs is not limiting the splicing of U12-type introns (Q35057511)

6 August 2017

The abundance of the spliceosomal snRNPs is not limiting the splicing of U12-type introns (English)

1 reference

6 August 2017

0 references

Mikko J Frilander

3

0 references

author name string

Heli K J Pessa

series ordinal

1

1 reference

PubMed ID

16957280

6 August 2017

Annukka Ruokolainen

series ordinal

2

1 reference

PubMed ID

16957280

6 August 2017

language of work or name

English

0 references

publication date

6 September 2006

1 reference

6 August 2017

1 reference

6 August 2017

12

1 reference

6 August 2017

10

1 reference

6 August 2017

1883-1892

1 reference

Arrested yeast splicing complexes indicate stepwise snRNP recruitment during in vivo spliceosome assembly

6 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Splicing of a rare class of introns by the U12-dependent spliceosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Comparison of splice sites in mammals and chicken

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Identification of an evolutionarily divergent U11 small nuclear ribonucleoprotein particle in Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

The human 18S U11/U12 snRNP contains a set of novel proteins not found in the U2-dependent spliceosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

U4 small nuclear RNA can function in both the major and minor spliceosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Splicing double: insights from the second spliceosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Identification, characterization and molecular phylogeny of U12-dependent introns in the Arabidopsis thaliana genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

The U1 snRNP base pairs with the 5' splice site within a penta-snRNP complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Allosteric cascade of spliceosome activation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

The splicing of U12-type introns can be a rate-limiting step in gene expression

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Human U4/U6.U5 and U4atac/U6atac.U5 tri-snRNPs exhibit similar protein compositions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Biochemical and genetic analyses of the U5, U6, and U4/U6 x U5 small nuclear ribonucleoproteins from Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

A computational scan for U12-dependent introns in the human genome sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Functions of SR proteins in the U12-dependent AT-AC pre-mRNA splicing pathway.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Identification of both shared and distinct proteins in the major and minor spliceosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Conservation of functional features of U6atac and U12 snRNAs between vertebrates and higher plants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Initial recognition of U12-dependent introns requires both U11/5' splice-site and U12/branchpoint interactions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Evolutionary fates and origins of U12-type introns.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Base pairing with U6atac snRNA is required for 5' splice site activation of U12-dependent introns in vivo

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

A spliceosomal recycling factor that reanneals U4 and U6 small nuclear ribonucleoprotein particles

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Pre-mRNA splicing: the discovery of a new spliceosome doubles the challenge

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

U11 snRNA interacts in vivo with the 5' splice site of U12-dependent (AU-AC) pre-mRNA introns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

U1-mediated exon definition interactions between AT-AC and GT-AG introns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Highly diverged U4 and U6 small nuclear RNAs required for splicing rare AT-AC introns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

A novel spliceosome containing U11, U12, and U5 snRNPs excises a minor class (AT-AC) intron in vitro

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Requirement of U12 snRNA for in vivo splicing of a minor class of eukaryotic nuclear pre-mRNA introns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Additional low-abundance human small nuclear ribonucleoproteins: U11, U12, etc

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

U4 small nuclear RNA dissociates from a yeast spliceosome and does not participate in the subsequent splicing reaction

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

RNA-protein interactions in the nuclei of Xenopus oocytes: complex formation and processing activity on the regulatory intron of ribosomal protein gene L1.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1581978

Dynamic exchanges of RNA interactions leading to catalytic core formation in the U12-dependent spliceosome

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16957280

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The spliceosome: no assembly required?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16957280

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

SR proteins can compensate for the loss of U1 snRNP functions in vitro

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16957280

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1261/RNA.213906

1 reference

6 August 2017

1 reference

6 August 2017

1 reference

PubMed ID

16957280