Selective enrichment and identification of azide-tagged cross-linked peptides using chemical ligation and mass spectrometry (Q35057799)

6 August 2017

title

Selective enrichment and identification of azide-tagged cross-linked peptides using chemical ligation and mass spectrometry (English)

1 reference

6 August 2017

Danielle Vellucci

1

1 reference

6 August 2017

Athit Kao

2

1 reference

6 August 2017

Robyn M Kaake

3

1 reference

6 August 2017

Scott D Rychnovsky

4

1 reference

6 August 2017

Lan Huang

5

1 reference

6 August 2017

language of work or name

1 reference

24 April 2010

1 reference

Journal of the American Society for Mass Spectrometry

6 August 2017

published in

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6 August 2017

volume

21

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6 August 2017

issue

8

1 reference

6 August 2017

page(s)

1432-1445

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Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry

6 August 2017

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1 reference

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8 July 2018

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8 July 2018

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8 July 2018

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Selective enrichment of azide-containing peptides from complex mixtures

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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In vivo identification of the outer membrane protein OmcA-MtrC interaction network in Shewanella oneidensis MR-1 cells using novel hydrophobic chemical cross-linkers

8 July 2018

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Identification of protein targets of 4-hydroxynonenal using click chemistry for ex vivo biotinylation of azido and alkynyl derivatives.

8 July 2018

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Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking

8 July 2018

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8 July 2018

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High resolution X-ray crystallographic structure of bovine heart cytochrome c and its application to the design of an electron transfer biosensor

8 July 2018

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An aptly positioned azido group in the spacer of a protein cross-linker for facile mapping of lysines in close proximity.

8 July 2018

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Activity-based probes for proteomic profiling of histone deacetylase complexes

8 July 2018

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8 July 2018

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Identification of novel quaternary domain interactions in the Hsp90 chaperone, GRP94.

8 July 2018

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Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions.

8 July 2018

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An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network.

8 July 2018

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8 July 2018

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Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.

8 July 2018

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Isotopically coded cleavable cross-linker for studying protein-protein interaction and protein complexes

8 July 2018

1 reference

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A strain-promoted [3 + 2] azide-alkyne cycloaddition for covalent modification of biomolecules in living systems

8 July 2018

1 reference

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Unraveling the interface of signal recognition particle and its receptor by using chemical cross-linking and tandem mass spectrometry

8 July 2018

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Identification of protein-protein interactions using in vivo cross-linking and mass spectrometry

8 July 2018

1 reference

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Metabolic functionalization of recombinant glycoproteins

8 July 2018

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Polytriazoles as copper(I)-stabilizing ligands in catalysis

8 July 2018

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Mapping spatial proximities of sulfhydryl groups in proteins using a fluorogenic cross-linker and mass spectrometry

8 July 2018

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The Staudinger ligation-a gift to chemical biology.

8 July 2018

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Time-controlled transcardiac perfusion cross-linking for the study of protein interactions in complex tissues

8 July 2018

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Profiling enzyme activities in vivo using click chemistry methods

8 July 2018

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In vivo protein cross-linking.

8 July 2018

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Chemical cross-linking and mass spectrometry for mapping three-dimensional structures of proteins and protein complexes

8 July 2018

1 reference

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Azide-alkyne coupling: a powerful reaction for bioconjugate chemistry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3119349

Isotopically labeled crosslinking reagents: resolution of mass degeneracy in the identification of crosslinked peptides.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3119349

Mapping low-resolution three-dimensional protein structures using chemical cross-linking and Fourier transform ion-cyclotron resonance mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3119349

MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3119349

Chemical cross-linking and mass spectrometry for protein structural modeling.

8 July 2018

1 reference

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A modular cross-linking approach for exploring protein interactions

8 July 2018

1 reference

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A top down approach to protein structural studies using chemical cross-linking and Fourier transform mass spectrometry.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3119349

A structure for the yeast prohibitin complex: Structure prediction and evidence from chemical crosslinking and mass spectrometry.

8 July 2018

1 reference

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A stepwise huisgen cycloaddition process: copper(I)-catalyzed regioselective "ligation" of azides and terminal alkynes

8 July 2018

1 reference

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Intramolecular cross-linking experiments on cytochrome c and ribonuclease A using an isotope multiplet method.

8 July 2018

1 reference

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Incorporation of azides into recombinant proteins for chemoselective modification by the Staudinger ligation

8 July 2018

1 reference

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Binding of neural cell adhesion molecules (N-CAMs) to the cellular prion protein

8 July 2018

1 reference

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Mapping protein interfaces with a fluorogenic cross-linker and mass spectrometry: application to nebulin-calmodulin complexes

8 July 2018

1 reference

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A new crosslinker for mass spectrometric analysis of the quaternary structure of protein complexes

8 July 2018

1 reference

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A "traceless" Staudinger ligation for the chemoselective synthesis of amide bonds

8 July 2018

1 reference

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High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry.

8 July 2018

1 reference

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Cell surface engineering by a modified Staudinger reaction

8 July 2018

1 reference

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A generic strategy to analyze the spatial organization of multi-protein complexes by cross-linking and mass spectrometry.

8 July 2018

1 reference

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Model for stathmin/OP18 binding to tubulin

8 July 2018

1 reference

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Structure and assembly of the catalytic region of human complement protease C1r: a three-dimensional model based on chemical cross-linking and homology modeling.

8 July 2018

1 reference

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Algorithms for identifying protein cross-links via tandem mass spectrometry.

8 July 2018

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Isotope-coded and affinity-tagged cross-linking (ICATXL): an efficient strategy to probe protein interaction surfaces

21 January 2018

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Isotope-tagged cross-linking reagents. A new tool in mass spectrometric protein interaction analysis

21 January 2018

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Photocrosslinking and click chemistry enable the specific detection of proteins interacting with phospholipids at the membrane interface

21 January 2018

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Activity-based protein profiling in vivo using a copper(i)-catalyzed azide-alkyne [3 + 2] cycloaddition

21 January 2018

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A Comparative Study of Bioorthogonal Reactions with Azides

21 January 2018

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21 January 2018

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Non-radioactive detection of palmitoylated mitochondrial proteins using an azido-palmitate analogue.

25 October 2018

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Shotgun cross-linking analysis for studying quaternary and tertiary protein structures

21 January 2018

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Partial acetylation of lysine residues improves intraprotein cross-linking.

21 January 2018

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Development of a novel chemical probe for the selective enrichment of phosphorylated serine- and threonine-containing peptides

21 January 2018

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Characterization of an Antagonist Interleukin-6 Dimer by Stable Isotope Labeling, Cross-linking, and Mass Spectrometry

25 October 2018

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Molecular contacts between nebulin and actin: cross-linking of nebulin modules to the N-terminus of actin

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20472459

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mass spectrometry identifiable cross-linking strategy for studying protein-protein interactions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20472459

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.JASMS.2010.04.004

1 reference

Dimensions Publication ID

6 August 2017

0 references

1 reference

6 August 2017

1 reference