Palindromic sequence artifacts generated during next generation sequencing library preparation from historic and ancient DNA. (Q35114415)

6 August 2017

title

Palindromic sequence artifacts generated during next generation sequencing library preparation from historic and ancient DNA. (English)

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6 August 2017

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Bastiaan Star

1

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Gregor D Gilfillan

Gregor D Gilfillan

5

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Sissel Jentoft

Sissel Jentoft

10

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Lex Nederbragt

Alexander J Nederbragt

2

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Nils Christian Stenseth

Nils Chr Stenseth

8

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Kjetill S. Jakobsen

9

Kjetill S Jakobsen

1 reference

6 August 2017

6

Ian R Bradbury

1 reference

6 August 2017

7

Christophe Pampoulie

1 reference

6 August 2017

4

Morten Skage

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6 August 2017

Marianne H S Hansen

3

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6 August 2017

language of work or name

English

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publication date

7 March 2014

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6 August 2017

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6 August 2017

volume

9

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6 August 2017

issue

3

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6 August 2017

page(s)

e89676

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Creative Commons Attribution 4.0 International

6 August 2017

copyright license

start time

7 March 2014

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Ligation bias in illumina next-generation DNA libraries: implications for sequencing ancient genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Single-stranded DNA library preparation for the sequencing of ancient or damaged DNA.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

A high-coverage genome sequence from an archaic Denisovan individual

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

AdapterRemoval: easy cleaning of next-generation sequencing reads

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Improving ancient DNA read mapping against modern reference genomes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Next-generation sequencing offers new insights into DNA degradation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Using Tablet for visual exploration of second-generation sequencing data

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Length and GC-biases during sequencing library amplification: a comparison of various polymerase-buffer systems with ancient and modern DNA sequencing libraries

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

An Aboriginal Australian genome reveals separate human dispersals into Asia

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

The genome sequence of Atlantic cod reveals a unique immune system

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

True single-molecule DNA sequencing of a pleistocene horse bone

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

mapDamage: testing for damage patterns in ancient DNA sequences

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Illumina sequencing library preparation for highly multiplexed target capture and sequencing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

The complete mitochondrial DNA genome of an unknown hominin from southern Siberia

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Ancient human genome sequence of an extinct Palaeo-Eskimo

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

The Neandertal genome and ancient DNA authenticity

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Targeted retrieval and analysis of five Neandertal mtDNA genomes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Fast and accurate short read alignment with Burrows-Wheeler transform

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

A large genome center's improvements to the Illumina sequencing system

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Patterns of damage in genomic DNA sequences from a Neandertal

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

OligoCalc: an online oligonucleotide properties calculator.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

Genetic analyses from ancient DNA

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3946424

10.1371/JOURNAL.PONE.0089676

9 July 2018

Identifiers

DOI

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release_itpehlsszrftxclitv4cwmvklm

6 August 2017

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1 reference

Fatcat

https://api.fatcat.wiki/v0/release/itpehlsszrftxclitv4cwmvklm

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

3946424

1 reference

6 August 2017

1 reference