Large-scale in silico modeling of metabolic interactions between cell types in the human brain (Q35117087)

6 August 2017

Large-scale in silico modeling of metabolic interactions between cell types in the human brain (English)

1 reference

6 August 2017

Nathan E Lewis

1

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Roland Eils

object named as

Roland Eils

10

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Bernhard Palsson

12

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Bernhard Ø Palsson

1 reference

6 August 2017

Gunnar Schramm

2

1 reference

6 August 2017

Aarash Bordbar

3

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6 August 2017

Jan Schellenberger

4

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6 August 2017

Michael P Andersen

5

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6 August 2017

Jeffrey K Cheng

6

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6 August 2017

Nilam Patel

7

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6 August 2017

Alex Yee

8

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6 August 2017

Randall A Lewis

9

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6 August 2017

Rainer König

11

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6 August 2017

21 November 2010

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6 August 2017

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6 August 2017

28

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6 August 2017

1279-1285

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6 August 2017

12

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https://scigraph.springernature.com/pub.10.1038/nbt.1711

6 August 2017

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PathWave: discovering patterns of differentially regulated enzymes in metabolic pathways

9 July 2018

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What is flux balance analysis?

9 July 2018

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Human TUBB3 mutations perturb microtubule dynamics, kinesin interactions, and axon guidance

9 July 2018

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A protocol for generating a high-quality genome-scale metabolic reconstruction

9 July 2018

1 reference

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A global view of protein expression in human cells, tissues, and organs

9 July 2018

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Applications of genome-scale metabolic reconstructions

9 July 2018

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Identification of neuronal nuclei (NeuN) as Fox-3, a new member of the Fox-1 gene family of splicing factors

9 July 2018

1 reference

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Bidirectionality and compartmentation of metabolic fluxes are revealed in the dynamics of isotopomer networks

9 July 2018

1 reference

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The implications of human metabolic network topology for disease comorbidity

9 July 2018

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The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli

9 July 2018

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Context-specific metabolic networks are consistent with experiments

9 July 2018

1 reference

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Altered neuronal gene expression in brain regions differentially affected by Alzheimer's disease: a reference data set.

9 July 2018

1 reference

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Reconstruction and flux analysis of coupling between metabolic pathways of astrocytes and neurons: application to cerebral hypoxia

9 July 2018

1 reference

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New surveyor tools for charting microbial metabolic maps.

9 July 2018

1 reference

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Cytochrome c oxidase deficiency in neurons decreases both oxidative stress and amyloid formation in a mouse model of Alzheimer's disease

9 July 2018

1 reference

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Global reconstruction of the human metabolic network based on genomic and bibliomic data

9 July 2018

1 reference

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Single cell gene expression profiling in Alzheimer's disease

9 July 2018

1 reference

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Human protein reference database--2006 update

9 July 2018

1 reference

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Astrocyte-endothelial interactions at the blood-brain barrier

9 July 2018

1 reference

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Modulation of memory by insulin and glucose: neuropsychological observations in Alzheimer's disease

9 July 2018

1 reference

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Functional brain abnormalities in young adults at genetic risk for late-onset Alzheimer's dementia

9 July 2018

1 reference

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Identification of a polymorphic, neuron-specific chromatin remodeling complex

9 July 2018

1 reference

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Role of mitochondria in neuronal apoptosis

9 July 2018

1 reference

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Quantification of the GABA shunt and the importance of the GABA shunt versus the 2-oxoglutarate dehydrogenase pathway in GABAergic neurons.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Modulation of hippocampal acetylcholine release and spontaneous alternation scores by intrahippocampal glucose injections.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Regulation of mitochondrial pyruvate dehydrogenase activity by tau protein kinase I/glycogen synthase kinase 3beta in brain

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Unsolved problems in the cholinergic nervous system.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Synapsin I (protein I), a nerve terminal-specific phosphoprotein. I. Its general distribution in synapses of the central and peripheral nervous system demonstrated by immunofluorescence in frozen and plastic sections

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Decreased synthesis of acetylcholine accompanying impaired oxidation of pyruvic acid in rat brain minces

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Close coupling between astrocytic and neuronal metabolisms to fulfill anaplerotic and energy needs in the rat brain

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Statistical analysis of metabolic pathways of brain metabolism at steady state.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

The power of cooperative investigation: summary and comparison of the HUPO Brain Proteome Project pilot study results.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Inhibitors of the alpha-ketoglutarate dehydrogenase complex alter [1-13C]glucose and [U-13C]glutamate metabolism in cerebellar granule neurons

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Mitochondrial abnormalities in Alzheimer brain: mechanistic implications

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Metabolic flux analysis as a tool for the elucidation of the metabolism of neurotransmitter glutamate.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Beta-amyloid inhibits integrated mitochondrial respiration and key enzyme activities

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Ectopic expression of the Dlx genes induces glutamic acid decarboxylase and Dlx expression

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Alpha-ketoglutarate dehydrogenase in Alzheimer brains bearing the APP670/671 mutation.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Regional glucose metabolic abnormalities are not the result of atrophy in Alzheimer's disease.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Olfaction in persons with Alzheimer's disease.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Cerebral blood flow and metabolic rate of oxygen, glucose, lactate, pyruvate, ketone bodies and amino acids.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140076

Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions

27 September 2018

1 reference

Messy biology and the origins of evolutionary innovations

21 January 2018

1 reference

The control of the false discovery rate in multiple testing under dependency

21 January 2018

1 reference

[H-Invitational Database: integrated database of human genes]

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21102456

12 December 2020

inferred from PubMed ID database lookup

Cerebral blood flow and metabolic rate of oxygen, glucose, lactate, pyruvate, ketone bodies and amino acids

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21102456

12 December 2020

inferred from PubMed ID database lookup

Network-based prediction of human tissue-specific metabolism

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21102456

12 December 2020

inferred from PubMed ID database lookup

Drug off-target effects predicted using structural analysis in the context of a metabolic network model

1 reference

7 January 2021

inferred from DOI database lookup

The challenges of integrating multi-omic data sets

1 reference

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NBT.1711

1 reference

6 August 2017

1 reference

6 August 2017

1 reference