Tackling soil diversity with the assembly of large, complex metagenomes (Q35121676)

6 August 2017

Tackling soil diversity with the assembly of large, complex metagenomes (English)

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Correction for Howe et al., Tackling soil diversity with the assembly of large, complex metagenomes

6 August 2017

corrigendum / erratum

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author

C. Titus Brown

6

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6 August 2017

Janet K Jansson

2

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Susannah G. Tringe

object named as

Susannah G Tringe

4

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James M. Tiedje

5

object named as

James M Tiedje

1 reference

6 August 2017

Stephanie A. Malfatti

3

object named as

Stephanie A Malfatti

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6 August 2017

Adina Chuang Howe

1

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6 August 2017

language of work or name

English

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publication date

14 March 2014

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Proceedings of the National Academy of Sciences of the United States of America

6 August 2017

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6 August 2017

111

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6 August 2017

13

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6 August 2017

4904-4909

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A culture-independent sequence-based metagenomics approach to the investigation of an outbreak of Shiga-toxigenic Escherichia coli O104:H4.

6 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Ray Meta: scalable de novo metagenome assembly and profiling.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Scaling metagenome sequence assembly with probabilistic de Bruijn graphs

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Untangling genomes from metagenomes: revealing an uncultured class of marine Euryarchaeota

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Meta-IDBA: a de Novo assembler for metagenomic data

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Enterotypes of the human gut microbiome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Metagenomic discovery of biomass-degrading genes and genomes from cow rumen

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

A human gut microbial gene catalogue established by metagenomic sequencing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

De novo assembly of human genomes with massively parallel short read sequencing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Metagenomics: read length matters

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Short read fragment assembly of bacterial genomes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

DNA-DNA hybridization values and their relationship to whole-genome sequence similarities

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Computational improvements reveal great bacterial diversity and high metal toxicity in soil

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Comparative metagenomics of microbial communities

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

Environmental genome shotgun sequencing of the Sargasso Sea

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

An Eulerian path approach to DNA fragment assembly

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3977251

9 July 2018

Identifiers

DOI

10.1073/PNAS.1402564111

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6 August 2017

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6 August 2017

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