Shifting the paradigm from pathogens to pathobiome: new concepts in the light of meta-omics. (Q35122256)

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10 March 2020

review article

4 references

27 July 2020

13 November 2020

22 August 2022

Shifting the paradigm from pathogens to pathobiome: new concepts in the light of meta-omics (English)

1 reference

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10 March 2020

1 reference

16 September 2019

host microbial interaction

1 reference

27 July 2020

1 reference

13 November 2020

3

1 reference

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Jean-François Cosson

4

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Marc-Henri Lebrun

6

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Yves Le Loir

7

1 reference

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Philippe Roumagnac

10

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Thierry Candresse

11

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5

Marie-Agnès Jacques

1 reference

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10 March 2020

Muriel Vayssier-Taussat

1

object named as

Muriel Vayssier-Taussat

1 reference

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10 March 2020

author name string

Emmanuel Albina

2

1 reference

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10 March 2020

Mylène Ogliastro

8

1 reference

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Marie-Agnès Petit

9

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10 March 2020

publication date

5 March 2014

6 references

20 June 2019

16 September 2019

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27 July 2020

13 November 2020

22 August 2022

Frontiers in Cellular and Infection Microbiology

6 references

20 June 2019

16 September 2019

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27 July 2020

13 November 2020

22 August 2022

4

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10 March 2020

page(s)

29

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Creative Commons Attribution 3.0 Unported

10 March 2020

copyright license

5 references

20 June 2019

16 September 2019

27 July 2020

13 November 2020

Microbial phylogenetic profiling with the Pacific Biosciences sequencing platform

22 August 2022

0 references

1 reference

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The human virome: new tools and concepts

28 July 2018

1 reference

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Viral pathogen discovery

1 reference

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1 reference

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A Wolbachia wMel transinfection in Aedes albopictus is not detrimental to host fitness and inhibits Chikungunya virus

28 July 2018

1 reference

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A gene transfer agent and a dynamic repertoire of secretion systems hold the keys to the explosive radiation of the emerging pathogen Bartonella.

28 July 2018

1 reference

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The skin microbiome: current perspectives and future challenges

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1 reference

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Insect symbiont facilitates vector acquisition, retention, and transmission of plant virus

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1 reference

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The native Wolbachia symbionts limit transmission of dengue virus in Aedes albopictus

28 July 2018

1 reference

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1 reference

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1 reference

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Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens' theorem

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1 reference

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The shared antibiotic resistome of soil bacteria and human pathogens

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1 reference

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Next-generation sequencing approaches to understanding the oral microbiome

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1 reference

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Functional assignment of metagenomic data: challenges and applications

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1 reference

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1 reference

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1 reference

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1 reference

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28 July 2018

1 reference

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Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae

28 July 2018

1 reference

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1 reference

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Intestinal microbiota promote enteric virus replication and systemic pathogenesis

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1 reference

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28 July 2018

1 reference

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The oral microbiome in health and disease and the potential impact on personalized dental medicine

28 July 2018

1 reference

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Pathobionts of the gastrointestinal microbiota and inflammatory disease

28 July 2018

1 reference

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Microbiome influences on insect host vector competence

28 July 2018

1 reference

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Soil-specific limitations for access and analysis of soil microbial communities by metagenomics

28 July 2018

1 reference

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28 July 2018

1 reference

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Recent human-to-poultry host jump, adaptation, and pandemic spread of Staphylococcus aureus

28 July 2018

1 reference

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454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

28 July 2018

1 reference

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Metagenomic signatures of 86 microbial and viral metagenomes

28 July 2018

1 reference

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

28 July 2018

1 reference

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Bacterial colonization of leaves: a spectrum of strategies

28 July 2018

1 reference

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Virus infection improves drought tolerance

28 July 2018

1 reference

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Strategies for accessing soil metagenome for desired applications.

28 July 2018

1 reference

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Rules of engagement: interspecies interactions that regulate microbial communities

28 July 2018

1 reference

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Commensals, bacterial pathogens and intestinal inflammation: an intriguing ménage à trois

28 July 2018

1 reference

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Microbial ecology of four coral atolls in the Northern Line Islands.

28 July 2018

1 reference

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1 reference

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Marine viruses--major players in the global ecosystem

28 July 2018

1 reference

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Predation on prokaryotes in the water column and its ecological implications

28 July 2018

1 reference

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Pathogenicity islands and the evolution of microbes

28 July 2018

1 reference

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Lateral gene transfer and the nature of bacterial innovation

28 July 2018

1 reference

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Host-pathogen interactions: redefining the basic concepts of virulence and pathogenicity

28 July 2018

1 reference

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A GroEL homologue from endosymbiotic bacteria of the whitefly Bemisia tabaci is implicated in the circulative transmission of tomato yellow leaf curl virus

28 July 2018

1 reference

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cag, a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulence factors

28 July 2018

1 reference

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Comparative genomics reveals that a fish pathogenic bacterium Edwardsiella tarda has acquired the locus of enterocyte effacement (LEE) through horizontal gene transfer

28 July 2018

1 reference

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Bats carry pathogenic hepadnaviruses antigenically related to hepatitis B virus and capable of infecting human hepatocytes

27 September 2018

1 reference

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27 September 2018

1 reference

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The antibiotic resistance "mobilome": searching for the link between environment and clinic.

27 September 2018

1 reference

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Interpreting infective microbiota: the importance of an ecological perspective.

27 September 2018

1 reference

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Outbreak investigation using high-throughput genome sequencing within a diagnostic microbiology laboratory

27 September 2018

1 reference

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'Schmallenberg virus'--a novel orthobunyavirus emerging in Europe.

27 September 2018

1 reference

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Estimation of metagenome size and structure in an experimental soil microbiota from low coverage next-generation sequence data

27 September 2018

1 reference

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Gastric Helicobacter spp. in animal models: pathogenesis and modulation by extragastric coinfections

27 September 2018

1 reference

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Context matters - the complex interplay between resistome genotypes and resistance phenotypes

27 September 2018

1 reference

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Natural microbe-mediated refractoriness to Plasmodium infection in Anopheles gambiae

27 September 2018

1 reference

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Metagenomic analyses: past and future trends

27 September 2018

1 reference

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Wolbachia modulates Chikungunya replication in Aedes albopictus

27 September 2018

1 reference

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Chikungunya-Wolbachia interplay in Aedes albopictus.

27 September 2018

1 reference

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Evolution of intracellular pathogens

27 September 2018

1 reference

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A virus in a fungus in a plant: three-way symbiosis required for thermal tolerance

27 September 2018

1 reference

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27 September 2018

The plant immune system

1 reference

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Emerging infectious diseases of plants: pathogen pollution, climate change and agrotechnology drivers

27 September 2018

1 reference

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Pathogen recognition and innate immunity

27 September 2018

1 reference

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Virus infection in remnant native bunchgrasses from invaded California grasslands

27 September 2018

1 reference

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Invasive annual grasses indirectly increase virus incidence in California native perennial bunchgrasses

27 September 2018

1 reference

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Priming in plant-pathogen interactions.

27 September 2018

1 reference

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Endosymbiotic bacteria associated with circulative transmission of potato leafroll virus by Myzus persicae

27 September 2018

1 reference

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27 September 2018

Identifiers

DOI

10.3389/FCIMB.2014.00029

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24634890%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24634890%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

PubMed publication ID

24634890

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24634890%20AND%20SRC:MED&resulttype=core&format=json