Structural basis for transcription reactivation by RapA (Q35129152)

25646438

6 August 2017

title

Structural basis for transcription reactivation by RapA (English)

1 reference

6 August 2017

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Yuhong Zuo

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

author name string

Thomas A Steitz

series ordinal

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

language of work or name

English

0 references

publication date

2 February 2015

1 reference

25646438

Proceedings of the National Academy of Sciences of the United States of America

6 August 2017

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

volume

112

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

issue

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

page(s)

2006-2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json

UvrD facilitates DNA repair by pulling RNA polymerase backwards

1 June 2020

cites work

1 reference

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The Mechanism of E. coli RNA Polymerase Regulation by ppGpp Is Suggested by the Structure of their Complex

28 July 2018

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Structural basis of transcription elongation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

REFMAC5 for the refinement of macromolecular crystal structures

28 July 2018

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Bacterial transcription terminators: the RNA 3'-end chronicles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

RNA polymerase fidelity and transcriptional proofreading

28 July 2018

1 reference

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Three-dimensional EM structure of an intact activator-dependent transcription initiation complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

RapA, the SWI/SNF subunit of Escherichia coli RNA polymerase, promotes the release of nascent RNA from transcription complexes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Phasercrystallographic software

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Structure of RapA, a Swi2/Snf2 Protein that Recycles RNA Polymerase During Transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Structural basis for transcription elongation by bacterial RNA polymerase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

The regulatory roles and mechanism of transcriptional pausing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Identification of multiple distinct Snf2 subfamilies with conserved structural motifs.

28 July 2018

1 reference

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Scaling and assessment of data quality

28 July 2018

1 reference

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X-Ray Structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase Core and Its Complex with DNA

28 July 2018

1 reference

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Coot: model-building tools for molecular graphics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Mfd, the bacterial transcription repair coupling factor: translocation, repair and termination

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Single molecule analysis of RNA polymerase elongation reveals uniform kinetic behavior

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

E. coli Transcription repair coupling factor (Mfd protein) rescues arrested complexes by promoting forward translocation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

RapA, a bacterial homolog of SWI2/SNF2, stimulates RNA polymerase recycling in transcription

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Integration of macromolecular diffraction data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Error estimation and bias correction in phase-improvement calculations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

A model for the mechanism of polymerase translocation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

An expanding family of helicases within the 'DEAD/H' superfamily

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

RNA polymerase backtracking in gene regulation and genome instability

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Overview of the CCP4 suite and current developments

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Structural basis for bacterial transcription-coupled DNA repair.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Ubiquitous transcriptional pausing is independent of RNA polymerase backtracking.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

Disruption of Escherichia coli hepA, an RNA polymerase-associated protein, causes UV sensitivity

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343176

A Ratchet Mechanism of Transcription Elongation and Its Control

27 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1417152112

Interaction between RNA polymerase and RapA, a bacterial homolog of the SWI/SNF protein family

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25646438

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

RapA, a novel RNA polymerase-associated protein, is a bacterial homolog of SWI2/SNF2

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25646438

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1417152112

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

0 references

1 reference

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1 June 2020

25646438

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25646438%20AND%20SRC:MED&resulttype=core&format=json