Molecular and physiological approaches to understanding the ecology of pollutant degradation (Q35172617)

6 August 2017

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title

Molecular and physiological approaches to understanding the ecology of pollutant degradation (English)

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6 August 2017

Kazuya Watanabe

1

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6 August 2017

Natsuko Hamamura

series ordinal

2

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6 August 2017

publication date

1 June 2003

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Current Opinion in Biotechnology

6 August 2017

published in

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6 August 2017

volume

14

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6 August 2017

issue

3

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6 August 2017

page(s)

289-295

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Microorganisms relevant to bioremediation

6 August 2017

cites work

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7 January 2021

Understanding the diversity in catabolic potential of microorganisms for the development of bioremediation strategies.

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7 January 2021

Synergistic interactions in the microbial world

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7 January 2021

Structural identification of a bacterial quorum-sensing signal containing boron

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7 January 2021

Towards elucidation of microbial community metabolic pathways: unravelling the network of carbon sharing in a pollutant-degrading bacterial consortium by immunocapture and isotopic ratio mass spectrometry

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7 January 2021

Rhodanobacter sp. strain BPC1 in a benzo[a]pyrene-mineralizing bacterial consortium

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7 January 2021

In situ gene expression in mixed-culture biofilms: evidence of metabolic interactions between community members

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7 January 2021

Is there a role for quorum sensing signals in bacterial biofilms?

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7 January 2021

Estimation of methanotroph abundance in a freshwater lake sediment

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7 January 2021

Group-specific monitoring of phenol hydroxylase genes for a functional assessment of phenol-stimulated trichloroethylene bioremediation

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7 January 2021

Development of catechol 2,3-dioxygenase-specific primers for monitoring bioremediation by competitive quantitative PCR.

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7 January 2021

A real-time polymerase chain reaction method for monitoring anaerobic, hydrocarbon-degrading bacteria based on a catabolic gene

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7 January 2021

Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA

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7 January 2021

In situ, real-time catabolic gene expression: extraction and characterization of naphthalene dioxygenase mRNA transcripts from groundwater.

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7 January 2021

Direct detection by in situ PCR of the amoA gene in biofilm resulting from a nitrogen removal process

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7 January 2021

In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plants

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7 January 2021

Abundance and phylogenetic affiliation of iron reducers in activated sludge as assessed by fluorescence in situ hybridization and microautoradiography

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7 January 2021

Phylogenetic identification and substrate uptake patterns of sulfate-reducing bacteria inhabiting an oxic-anoxic sewer biofilm determined by combining microautoradiography and fluorescent in situ hybridization

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7 January 2021

Stable-isotope-based labeling of styrene-degrading microorganisms in biofilters.

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7 January 2021

Identification of the functionally active methanotroph population in a peat soil microcosm by stable-isotope probing

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7 January 2021

(13)C incorporation into DNA as a means of identifying the active components of ammonia-oxidizer populations

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7 January 2021

RNA stable isotope probing, a novel means of linking microbial community function to phylogeny.

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7 January 2021

Stable hydrogen and carbon isotope fractionation during microbial toluene degradation: mechanistic and environmental aspects.

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7 January 2021

Carbon and hydrogen stable isotope fractionation during aerobic bacterial degradation of aromatic hydrocarbons.

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7 January 2021

Isolate PM1 populations are dominant and novel methyl tert-butyl ether-degrading bacterial in compost biofilter enrichments

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7 January 2021

Isolation and characterization of Novosphingobium sp. strain MT1, a dominant polychlorophenol-degrading strain in a groundwater bioremediation system

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7 January 2021

Molecular detection, isolation, and physiological characterization of functionally dominant phenol-degrading bacteria in activated sludge

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7 January 2021

Enrichment versus biofilm culture: a functional and phylogenetic comparison of polycyclic aromatic hydrocarbon-degrading microbial communities

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7 January 2021

High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia.

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Cyclic AMP and acyl homoserine lactones increase the cultivation efficiency of heterotrophic bacteria from the central Baltic Sea.

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7 January 2021

Reclamation of an activated-sludge microbial consortium by selective biostimulation

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Stable augmentation of activated sludge with foreign catabolic genes harboured by an indigenous dominant bacterium

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Gene expression monitoring in soils by mRNA analysis and gene lux fusions

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Carbon limitation induces sigma(S)-dependent gene expression in Pseudomonas fluorescens in soil

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7 January 2021

Biological sensor for sucrose availability: relative sensitivities of various reporter genes

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7 January 2021

Solid-phase contact assay that uses a lux-marked Nitrosomonas europaea reporter strain to estimate toxicity of bioavailable linear alkylbenzene sulfonate in soil

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7 January 2021

Bioreporters in microbial ecology

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7 January 2021

Development and characterization of a green fluorescent protein-based bacterial biosensor for bioavailable toluene and related compounds

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7 January 2021

Assessing the role of Pseudomonas aeruginosa surface-active gene expression in hexadecane biodegradation in sand

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7 January 2021

Construction and characterization of a proU-gfp transcriptional fusion that measures water availability in a microbial habitat

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7 January 2021

Measuring mass transfer processes of octane with the help of an alkSalkB::gfp-tagged Escherichia coli

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7 January 2021

Living biosensors for the management and manipulation of microbial consortia

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7 January 2021

Assessment of GFP fluorescence in cells of Streptococcus gordonii under conditions of low pH and low oxygen concentration

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7 January 2021

Flow cytometric techniques to characterise physiological states of Acinetobacter calcoaceticus.

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7 January 2021

Rapid assessment of the physiological status of the polychlorinated biphenyl degrader Comamonas testosteroni TK102 by flow cytometry

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Influence of effluent irrigation on community composition and function of ammonia-oxidizing bacteria in soil

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Analysis of sMMO-containing type I methanotrophs in Lake Washington sediment

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Detection of methanotrophs with highly divergent pmoA genes from Arctic soils

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Bacterial populations occuring in a trichloroethylene-contaminated aquifer during methane injection.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Molecular screening for alkane hydroxylase genes in Gram-negative and Gram-positive strains

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Distribution of alkB genes within n-alkane-degrading bacteria

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Molecular detection and diversity of polycyclic aromatic hydrocarbon-degrading bacteria isolated from geographically diverse sites

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Insights into the genetic diversity of initial dioxygenases from PAH-degrading bacteria

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https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Design of PCR primers and a gene probe for extensive detection of poly(3-hydroxybutyrate) (PHB)-degrading bacteria possessing fibronectin type III linker type-PHB depolymerases

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

Analysis of bacterial community structure in sulfurous-oil-containing soils and detection of species carrying dibenzothiophene desulfurization (dsz) genes

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

nahR, encoding a LysR-type transcriptional regulator, is highly conserved among naphthalene-degrading bacteria isolated from a coal tar waste-contaminated site and in extracted community DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0958-1669%2803%2900059-4

7 January 2021

10.1016/S0958-1669(03)00059-4

Identifiers

DOI

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6 August 2017

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