Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue (Q35176679)

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English	Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue	scientific article

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scholarly article

1 reference

Europe PubMed Central

6 August 2017

Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue (English)

1 reference

Europe PubMed Central

6 August 2017

Jakob Skou Pedersen

14

1 reference

Europe PubMed Central

6 August 2017

Torben Falck Ørntoft

15

object named as

Torben Falck Ørntoft

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Karina Dalsgaard Sørensen

13

object named as

Karina Dalsgaard Sørensen

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object named as

Søren Vang

6

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Iver Nordentoft

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Iver Nordentoft

7

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Karin Birkenkamp-Demtröder

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Karin Birkenkamp-Demtröder

8

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Claus Lindbjerg Andersen

object named as

Claus Lindbjerg Andersen

12

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object named as

Lars Dyrskjøt

16

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Stephen Hamilton-Dutoit

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Stephen Jacques Hamilton-Dutoit

5

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author name string

Jakob Hedegaard

1

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Europe PubMed Central

6 August 2017

Kasper Thorsen

2

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Europe PubMed Central

6 August 2017

Mette Katrine Lund

3

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Europe PubMed Central

6 August 2017

Anne-Mette K Hein

4

1 reference

Europe PubMed Central

6 August 2017

Mogens Kruhøffer

9

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Europe PubMed Central

6 August 2017

Henrik Hager

10

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Europe PubMed Central

6 August 2017

Bjarne Knudsen

11

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Europe PubMed Central

6 August 2017

language of work or name

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publication date

30 May 2014

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Europe PubMed Central

6 August 2017

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Europe PubMed Central

6 August 2017

9

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Europe PubMed Central

6 August 2017

5

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Europe PubMed Central

6 August 2017

e98187

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Europe PubMed Central

6 August 2017

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Creative Commons Attribution 4.0 International

30 May 2014

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April 2022 Public Data File from Crossref

copyright status

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Gene expression, single nucleotide variant and fusion transcript discovery in archival material from breast tumors

1 reference

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Comparison of clinical targeted next-generation sequence data from formalin-fixed and fresh-frozen tissue specimens

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Comparison of microRNA deep sequencing of matched formalin-fixed paraffin-embedded and fresh frozen cancer tissues

1 reference

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Comparative analysis of RNA sequencing methods for degraded or low-input samples

1 reference

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Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling

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Using next-generation sequencing for high resolution multiplex analysis of copy number variation from nanogram quantities of DNA from formalin-fixed paraffin-embedded specimens

1 reference

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A scaling normalization method for differential expression analysis of RNA-seq data

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Genome-scale DNA methylation mapping of clinical samples at single-nucleotide resolution

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edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

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Genome-wide massively parallel sequencing of formaldehyde fixed-paraffin embedded (FFPE) tumor tissues for copy-number- and mutation-analysis

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Small-sample estimation of negative binomial dispersion, with applications to SAGE data

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Systematic analysis of microRNA expression of RNA extracted from fresh frozen and formalin-fixed paraffin-embedded samples

1 reference

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Comparison of targeted next-generation sequencing (NGS) and real-time PCR in the detection of EGFR, KRAS, and BRAF mutations on formalin-fixed, paraffin-embedded tumor material of non-small cell lung carcinoma-superiority of NGS.

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Pathology tissue-chromatin immunoprecipitation, coupled with high-throughput sequencing, allows the epigenetic profiling of patient samples.

1 reference

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Reducing Sequence Artifacts in Amplicon-Based Massively Parallel Sequencing of Formalin-Fixed Paraffin-Embedded DNA by Enzymatic Depletion of Uracil-Containing Templates

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10.1371/JOURNAL.PONE.0098187

1 reference

Europe PubMed Central

6 August 2017

2014PLoSO...998187H

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1 reference

Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

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