Fast multiclonal clusterization of V(D)J recombinations from high-throughput sequencing (Q35178180)

24885090

7 August 2017

title

Fast multiclonal clusterization of V(D)J recombinations from high-throughput sequencing (English)

1 reference

24885090

high-throughput sequencing

7 August 2017

main subject

1 reference

1

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6 June 2020

Nathalie Grardel

7

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6 June 2020

Claude Preudhomme

9

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6 June 2020

Martin Figeac

10

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6 June 2020

author name string

Mikaël Salson

2

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6 June 2020

Marc Duez

3

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6 June 2020

Céline Villenet

4

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6 June 2020

Sabine Quief

5

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6 June 2020

Aurélie Caillault

6

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6 June 2020

Christophe Roumier

8

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6 June 2020

language of work or name

English

0 references

publication date

28 May 2014

1 reference

7 August 2017

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6 June 2020

volume

15

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6 June 2020

page(s)

409

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High-resolution antibody dynamics of vaccine-induced immune responses

6 June 2020

cites work

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13 July 2018

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13 July 2018

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13 July 2018

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Teleost fish mount complex clonal IgM and IgT responses in spleen upon systemic viral infection

13 July 2018

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13 July 2018

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EuroFlow standardization of flow cytometer instrument settings and immunophenotyping protocols

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Massive evolution of the immunoglobulin heavy chain locus in children with B precursor acute lymphoblastic leukemia

13 July 2018

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High-throughput VDJ sequencing for quantification of minimal residual disease in chronic lymphocytic leukemia and immune reconstitution assessment

13 July 2018

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13 July 2018

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13 July 2018

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Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million clonotypes.

13 July 2018

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The whole-organism heavy chain B cell repertoire from Zebrafish self-organizes into distinct network features

13 July 2018

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Clustering-based identification of clonally-related immunoglobulin gene sequence sets

13 July 2018

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Individual variation in the germline Ig gene repertoire inferred from variable region gene rearrangements.

13 July 2018

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Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing

13 July 2018

1 reference

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SoDA2: a Hidden Markov Model approach for identification of immunoglobulin rearrangements

13 July 2018

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Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing

13 July 2018

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High-throughput sequencing of the zebrafish antibody repertoire

13 July 2018

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IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis

13 July 2018

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iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences

13 July 2018

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13 July 2018

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13 July 2018

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IMGT/JunctionAnalysis: the first tool for the analysis of the immunoglobulin and T cell receptor complex V-J and V-D-J JUNCTIONs

13 July 2018

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Design and standardization of PCR primers and protocols for detection of clonal immunoglobulin and T-cell receptor gene recombinations in suspect lymphoproliferations: report of the BIOMED-2 Concerted Action BMH4-CT98-3936.

13 July 2018

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V(D)J Recombination and the Evolution of the Adaptive Immune System

13 July 2018

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13 July 2018

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High-throughput sequencing detects minimal residual disease in acute T lymphoblastic leukemia.

13 July 2018

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Benchmarking the performance of human antibody gene alignment utilities using a 454 sequence dataset.

27 September 2018

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27 September 2018

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No evidence for the use of DIR, D-D fusions, chromosome 15 open reading frames or VH replacement in the peripheral repertoire was found on application of an improved algorithm, JointML, to 6329 human immunoglobulin H rearrangements.

27 September 2018

1 reference

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Characterization of the human Ig heavy chain antigen binding complementarity determining region 3 using a newly developed software algorithm, JOINSOLVER.

27 September 2018

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Di- and trinucleotide target preferences of somatic mutagenesis in normal and autoreactive B cells

27 September 2018

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IMGT, the international ImMunoGeneTics information system, http://imgt.cines.fr: the reference in immunoinformatics

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24885090

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

IMGT, the international ImMunoGeneTics information system, http://imgt.cines.fr.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24885090

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Concurrent detection of minimal residual disease (MRD) in childhood acute lymphoblastic leukaemia by flow cytometry and real-time PCR

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24885090

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-15-409

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Dimensions Publication ID

6 June 2020

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6 June 2020

24885090

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