Differentially methylated CpG island within human XIST mediates alternative P2 transcription and YY1 binding (Q35189059)

7 August 2017

title

Differentially methylated CpG island within human XIST mediates alternative P2 transcription and YY1 binding (English)

1 reference

7 August 2017

1 reference

4

Carolyn J Brown

1 reference

7 August 2017

Andrew G Chapman

1

1 reference

7 August 2017

Allison M Cotton

series ordinal

2

1 reference

7 August 2017

Angela D Kelsey

series ordinal

3

1 reference

7 August 2017

publication date

9 September 2014

1 reference

7 August 2017

1 reference

7 August 2017

volume

15

1 reference

7 August 2017

page(s)

89

1 reference

Creative Commons Attribution 4.0 International

7 August 2017

copyright license

start time

9 September 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Comparative anatomy of chromosomal domains with imprinted and non-imprinted allele-specific DNA methylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

A human embryonic stem cell line adapted for high throughput screening

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Different flavors of X-chromosome inactivation in mammals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Patterns of regulatory activity across diverse human cell types predict tissue identity, transcription factor binding, and long-range interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

The macrosatellite DXZ4 mediates CTCF-dependent long-range intrachromosomal interactions on the human inactive X chromosome.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Rsx is a metatherian RNA with Xist-like properties in X-chromosome inactivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

YY1 tethers Xist RNA to the inactive X nucleation center

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

A user's guide to the encyclopedia of DNA elements (ENCODE)

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Ftx is a non-coding RNA which affects Xist expression and chromatin structure within the X-inactivation center region

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

The Long Noncoding RNA, Jpx, Is a Molecular Switch for X Chromosome Inactivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Variations of X chromosome inactivation occur in early passages of female human embryonic stem cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Identification of regulatory elements flanking human XIST reveals species differences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

RNF12 is an X-Encoded dose-dependent activator of X chromosome inactivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Inactive X chromosome-specific reduction in placental DNA methylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

X-inactivation reveals epigenetic anomalies in most hESC but identifies sublines that initiate as expected

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

X-chromosome inactivation and epigenetic fluidity in human embryonic stem cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Inducible XIST-dependent X-chromosome inactivation in human somatic cells is reversible

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Gene action in the X-chromosome of the mouse (Mus musculus L.)

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Comparative sequence analysis of the X-inactivation center region in mouse, human, and bovine

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Species differences in TSIX/Tsix reveal the roles of these genes in X-chromosome inactivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Chromosomal silencing and localization are mediated by different domains of Xist RNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Antisense transcription through the Xist locus mediates Tsix function in embryonic stem cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Identification of TSIX, encoding an RNA antisense to human XIST, reveals differences from its murine counterpart: implications for X inactivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

A functional role for Tsix transcription in blocking Xist RNA accumulation but not in X-chromosome choice

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Tsix, a gene antisense to Xist at the X-inactivation centre

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Stabilization and localization of Xist RNA are controlled by separate mechanisms and are not sufficient for X inactivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Induction of XIST expression from the human active X chromosome in mouse/human somatic cell hybrids by DNA demethylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Regulatory elements in the minimal promoter region of the mouse Xist gene

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Identification and characterization of the human XIST gene promoter: implications for models of X chromosome inactivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

XIST RNA paints the inactive X chromosome at interphase: evidence for a novel RNA involved in nuclear/chromosome structure

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Requirement for Xist in X chromosome inactivation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Evolutionary conservation of possible functional domains of the human and murine XIST genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Loss of methylation activates Xist in somatic but not in embryonic cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Localization of the X inactivation centre on the human X chromosome in Xq13.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

The product of the mouse Xist gene is a 15 kb inactive X-specific transcript containing no conserved ORF and located in the nucleus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4363909

Long-range cis effects of ectopic X-inactivation centres on a mouse autosome

28 July 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

Developmentally regulated Xist promoter switch mediates initiation of X inactivation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

Identification of clustered YY1 binding sites in imprinting control regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

Identification of a Ctcf cofactor, Yy1, for the X chromosome binary switch.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

Jpx RNA activates Xist by evicting CTCF.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

Eutherian mammals use diverse strategies to initiate X-chromosome inactivation during development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

ENCODE data in the UCSC Genome Browser: year 5 update

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

Mapping and analysis of chromatin state dynamics in nine human cell types

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

Methylation-sensitive binding of transcription factor YY1 to an insulator sequence within the paternally expressed imprinted gene, Peg3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

YY1 associates with the macrosatellite DXZ4 on the inactive X chromosome and binds with CTCF to a hypomethylated form in some male carcinomas

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12863-014-0089-4

Xist-deficient mice are defective in dosage compensation but not spermatogenesis

21 January 2018

1 reference

12 December 2020

Non-random X-chromosome inactivation in mouse X-autosome translocation embryos--location of the inactivation centre

1 reference

12 December 2020

X-chromosome deletions in embryo-derived (EK) cell lines associated with lack of X-chromosome inactivation

1 reference

12 December 2020

Epigenetic and Chromosomal Control of Gene Expression: Molecular and Genetic Analysis of X Chromosome Inactivation

1 reference

12 December 2020

10.1186/S12863-014-0089-4

Identifiers

DOI

1 reference

Dimensions Publication ID

7 August 2017

0 references

1 reference

7 August 2017

1 reference