Balancing selection and the evolution of functional polymorphism in Old World monkey TRIM5alpha (Q35191091)

7 August 2017

Balancing selection and the evolution of functional polymorphism in Old World monkey TRIM5alpha (English)

1 reference

7 August 2017

7

William Diehl

1 reference

7 August 2017

Ruchi M Newman

1

1 reference

7 August 2017

Laura Hall

2

1 reference

7 August 2017

Michelle Connole

3

1 reference

7 August 2017

Guo-Lin Chen

4

1 reference

7 August 2017

Shuji Sato

5

1 reference

7 August 2017

Eloisa Yuste

6

1 reference

7 August 2017

Eric Hunter

8

1 reference

7 August 2017

Amitinder Kaur

9

1 reference

7 August 2017

Gregory M Miller

10

1 reference

7 August 2017

Welkin E Johnson

11

1 reference

7 August 2017

language of work or name

English

0 references

publication date

1 December 2006

1 reference

Proceedings of the National Academy of Sciences of the United States of America

7 August 2017

1 reference

7 August 2017

103

1 reference

7 August 2017

19134-19139

1 reference

7 August 2017

50

1 reference

Role of common human TRIM5alpha variants in HIV-1 disease progression

7 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Effects of human TRIM5alpha polymorphisms on antiretroviral function and susceptibility to human immunodeficiency virus infection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Balancing selection and its effects on sequences in nearby genome regions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Independent evolution of bitter-taste sensitivity in humans and chimpanzees

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Specific recognition and accelerated uncoating of retroviral capsids by the TRIM5alpha restriction factor

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Genetic association of the antiviral restriction factor TRIM5alpha with human immunodeficiency virus type 1 infection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

High-frequency persistence of an impaired allele of the retroviral defense gene TRIM5alpha in humans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Retroviral restriction factor TRIM5alpha is a trimer

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

TRIM family proteins: retroviral restriction and antiviral defence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Naturally SIV-infected sooty mangabeys: are we closer to understanding why they do not develop AIDS?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

TRIM5alpha selectively binds a restriction-sensitive retroviral capsid

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Disruption of human TRIM5alpha antiviral activity by nonhuman primate orthologues

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

The B30.2(SPRY) domain of the retroviral restriction factor TRIM5alpha exhibits lineage-specific length and sequence variation in primates

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Retrovirus restriction by TRIM5alpha variants from Old World and New World primates

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Catarrhine primate divergence dates estimated from complete mitochondrial genomes: concordance with fossil and nuclear DNA evidence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Species-specific variation in the B30.2(SPRY) domain of TRIM5alpha determines the potency of human immunodeficiency virus restriction

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Positive selection of primate TRIM5alpha identifies a critical species-specific retroviral restriction domain

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

A single amino acid change in the SPRY domain of human Trim5alpha leads to HIV-1 restriction

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Cyclophilin interactions with incoming human immunodeficiency virus type 1 capsids with opposing effects on infectivity in human cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Intrinsic immunity: a front-line defense against viral attack

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Selection for loss of Ref1 activity in human cells releases human immunodeficiency virus type 1 from cyclophilin A dependence during infection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

A novel approach for producing lentiviruses that are limited to a single cycle of infection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

A Trim5-cyclophilin A fusion protein found in owl monkey kidney cells can restrict HIV-1.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

TRIM5alpha mediates the postentry block to N-tropic murine leukemia viruses in human cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Trim5alpha protein restricts both HIV-1 and murine leukemia virus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

The human and African green monkey TRIM5alpha genes encode Ref1 and Lv1 retroviral restriction factor activities

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Retrovirus resistance factors Ref1 and Lv1 are species-specific variants of TRIM5alpha

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Binding and susceptibility to postentry restriction factors in monkey cells are specified by distinct regions of the human immunodeficiency virus type 1 capsid

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Natural selection and molecular evolution in PTC, a bitter-taste receptor gene

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Variable sensitivity to substitutions in the N-terminal heptad repeat of Mason-Pfizer monkey virus transmembrane protein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Molecular analysis of the beta-globin gene cluster in the Niokholo Mandenka population reveals a recent origin of the beta(S) Senegal mutation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

The tripartite motif family identifies cell compartments

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Evolution of balanced genetic polymorphism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Worldwide DNA sequence variation in a 10-kilobase noncoding region on human chromosome 22

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Use of a transient assay for studying the genetic determinants of Fv1 restriction

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Normal T-cell turnover in sooty mangabeys harboring active simian immunodeficiency virus infection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

The signature of balancing selection: fungal mating compatibility gene evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Diverse host responses and outcomes following simian immunodeficiency virus SIVmac239 infection in sooty mangabeys and rhesus macaques.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Simian immunodeficiency virus replicates to high levels in sooty mangabeys without inducing disease

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Neutral behavior of shared polymorphism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Population biology of antigen presentation by MHC class I molecules

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

A composite estimate of primate phylogeny

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

The simian immunodeficiency viruses

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Prevalence of natural infection with simian immunodeficiency virus and simian T-cell leukemia virus type I in a breeding colony of sooty mangabey monkeys

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Adaptive evolution of primate TRIM5alpha, a gene restricting HIV-1 infection.

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Retrovirus restriction factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Human tripartite motif 5alpha domains responsible for retrovirus restriction activity and specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

The contribution of RING and B-box 2 domains to retroviral restriction mediated by monkey TRIM5alpha.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Characterization of TRIM5alpha trimerization and its contribution to human immunodeficiency virus capsid binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

HIV vaccine design: insights from live attenuated SIV vaccines

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Isolation and characterization of the first simian immunodeficiency virus from a feral sooty mangabey (Cercocebus atys) in West Africa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Nonpathogenic SIV infection of sooty mangabeys is characterized by limited bystander immunopathology despite chronic high-level viremia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Phylogenetic relationships of the macaques (Cercopithecidae: Macaca), inferred from mitochondrial DNA sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Identification of the regions of Fv1 necessary for murine leukemia virus restriction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Learning from rejection: the evolutionary biology of single-locus incompatibility

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Primate ABO glycosyltransferases: evidence for trans-species evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Functional replacement of the RING, B-box 2, and coiled-coil domains of tripartite motif 5alpha (TRIM5alpha) by heterologous TRIM domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

Hierarchical control of lymphocyte survival

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0605838103

History and origin of beta-thalassemia in Turkey: sequence haplotype diversity of beta-globin genes.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1679755

Evolution of introns and exons of class II major histocompatibility complex genes of vertebrates

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17142324

12 December 2020

inferred from PubMed ID database lookup

A limited role for balancing selection

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17142324

12 December 2020

inferred from PubMed ID database lookup

Natural selection at major histocompatibility complex loci of vertebrates

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17142324

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.0605838103

1 reference

release_y5anmuz7ozf4rnfvguzpb3pya4

7 August 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/y5anmuz7ozf4rnfvguzpb3pya4

24 November 2022

mapped directly with Wikidata item

PMCID

1679755

1 reference

7 August 2017

1 reference