Extension of a genetic network model by iterative experimentation and mathematical analysis (Q35193432)

7 August 2017

Extension of a genetic network model by iterative experimentation and mathematical analysis (English)

1 reference

7 August 2017

7

1 reference

7 August 2017

Matthew S Turner

6

0 references

author name string

James C W Locke

1

1 reference

7 August 2017

Megan M Southern

2

1 reference

7 August 2017

László Kozma-Bognár

3

1 reference

7 August 2017

Victoria Hibberd

4

1 reference

7 August 2017

Paul E Brown

5

1 reference

7 August 2017

28 June 2005

1 reference

Molecular Systems Biology

7 August 2017

1 reference

7 August 2017

1

1 reference

7 August 2017

2005.0013

1 reference

Design principles underlying circadian clocks

7 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Modelling genetic networks with noisy and varied experimental data: the circadian clock in Arabidopsis thaliana.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

The Arabidopsis thaliana clock.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Robustness properties of circadian clock architectures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Simulation of Drosophila circadian oscillations, mutations, and light responses by a model with VRI, PDP-1, and CLK.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

A detailed predictive model of the mammalian circadian clock

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Statistical mechanical approaches to models with many poorly known parameters

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

A suite of photoreceptors entrains the plant circadian clock

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Toward a detailed computational model for the mammalian circadian clock

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Light-regulated translation mediates gated induction of the Arabidopsis clock protein LHY.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Photoreceptors in Arabidopsis thaliana: light perception, signal transduction and entrainment of the endogenous clock

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Floral responses to photoperiod are correlated with the timing of rhythmic expression relative to dawn and dusk in Arabidopsis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Molecular basis of seasonal time measurement in Arabidopsis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

The Goodwin model: simulating the effect of light pulses on the circadian sporulation rhythm of Neurospora crassa.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Orchestrated transcription of key pathways in Arabidopsis by the circadian clock

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Interconnected feedback loops in the Neurospora circadian system

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Direct targeting of light signals to a promoter element-bound transcription factor.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Revised limit cycle oscillator model of human circadian pacemaker

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

GIGANTEA: a circadian clock-controlled gene that regulates photoperiodic flowering in Arabidopsis and encodes a protein with several possible membrane-spanning domains.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Loss of the circadian clock-associated protein 1 in Arabidopsis results in altered clock-regulated gene expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Molecular bases for circadian clocks

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Quantitative analysis of Drosophila period gene transcription in living animals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Integration of circadian and phototransduction pathways in the network controlling CAB gene transcription in Arabidopsis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

A simple model of circadian rhythms based on dimerization and proteolysis of PER and TIM.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

The F-box protein ZEITLUPE confers dosage-dependent control on the circadian clock, photomorphogenesis, and flowering time.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Targeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

The TIME FOR COFFEE gene maintains the amplitude and timing of Arabidopsis circadian clocks.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Dual role of TOC1 in the control of circadian and photomorphogenic responses in Arabidopsis

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Robust oscillations within the interlocked feedback model of Drosophila circadian rhythm.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

ELF3 modulates resetting of the circadian clock in Arabidopsis.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Cloning of the Arabidopsis clock gene TOC1, an autoregulatory response regulator homolog

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Control of circadian rhythms and photoperiodic flowering by the Arabidopsis GIGANTEA gene.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

The circadian clock. A plant's best friend in a spinning world

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1681447

Overlapping and Distinct Roles of PRR7 and PRR9 in the Arabidopsis Circadian Clock

15 November 2018

1 reference

12 December 2020

Life before the clock: modeling circadian evolution

1 reference

12 December 2020

Interlocked Feedback Loops Within the Drosophila Circadian Oscillator

1 reference

12 December 2020

Genes encoding pseudo-response regulators: insight into His-to-Asp phosphorelay and circadian rhythm in Arabidopsis thaliana

1 reference

12 December 2020

The ELF3 zeitnehmer regulates light signalling to the circadian clock

1 reference

12 December 2020

pH homeostasis of the circadian sporulation rhythm in clock mutants of Neurospora crassa

2 references

12 December 2020

Crossref

https://api.crossref.org/works/10.1038%2FMSB4100018

7 January 2021

inferred from DOI database lookup

Light response of the circadian waves of the APRR1/TOC1 quintet: when does the quintet start singing rhythmically in Arabidopsis?

1 reference

12 December 2020

The APRR1/TOC1 quintet implicated in circadian rhythms of Arabidopsis thaliana: I. Characterization with APRR1-overexpressing plants

1 reference

12 December 2020

Critical Role for CCA1 and LHY in Maintaining Circadian Rhythmicity in Arabidopsis

1 reference

12 December 2020

LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis

1 reference

12 December 2020

The ELF4 gene controls circadian rhythms and flowering time in Arabidopsis thaliana

1 reference

12 December 2020

Identifiers

DOI

10.1038/MSB4100018

1 reference

7 August 2017

1 reference

7 August 2017

1 reference