The coevolution of phycobilisomes: molecular structure adapting to functional evolution (Q35195139)

7 August 2017

title

The coevolution of phycobilisomes: molecular structure adapting to functional evolution (English)

1 reference

7 August 2017

0 references

0 references

Fei Shi

1

1 reference

7 August 2017

Song Qin

series ordinal

2

1 reference

7 August 2017

Yin-Chu Wang

series ordinal

3

1 reference

7 August 2017

publication date

29 August 2011

1 reference

Comparative and Functional Genomics

7 August 2017

published in

1 reference

7 August 2017

volume

2011

1 reference

7 August 2017

page(s)

230236

1 reference

Creative Commons Attribution 3.0 Unported

7 August 2017

copyright license

start time

1 January 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

Adaptive mutations in a human immunodeficiency virus type 1 envelope protein with a truncated V3 loop restore function by improving interactions with CD4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

InterMap3D: predicting and visualizing co-evolving protein residues.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Unravelling selection shifts among foot-and-mouth disease virus (FMDV) serotypes.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Why should we care about molecular coevolution?

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Phycobilisomes linker family in cyanobacterial genomes: divergence and evolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Detecting coevolution in and among protein domains

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid representation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Clustal W and Clustal X version 2.0

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

CAPS: coevolution analysis using protein sequences.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Persistent Hepatitis C Virus Infection In Vitro: Coevolution of Virus and Host

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

A novel method for detecting intramolecular coevolution: adding a further dimension to selective constraints analyses.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Elucidation of the molecular structures of components of the phycobilisome: reconstructing a giant

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Context dependence and coevolution among amino acid residues in proteins.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Solving the protein sequence metric problem

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

MUSCLE: multiple sequence alignment with high accuracy and high throughput

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Complete Genome Structure of Gloeobacter violaceus PCC 7421, a Cyanobacterium that Lacks Thylakoids

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

The Crystal Structure of a Novel Unmethylated Form of C-phycocyanin, a Possible Connector Between Cores and Rods in Phycobilisomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Structure of C-phycocyanin from Spirulina platensis at 2.2 A resolution: a novel monoclinic crystal form for phycobiliproteins in phycobilisomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Crystal structure of a light-harvesting protein C-phycocyanin from Spirulina platensis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Correlations among amino acid sites in bHLH protein domains: an information theoretic analysis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Crystal structure of C-phycocyanin from Cyanidium caldarium provides a new perspective on phycobilisome assembly

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Prochlorococcus, a marine photosynthetic prokaryote of global significance

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Cyanobacterial phycobilisomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

The phycobilisome, a light-harvesting complex responsive to environmental conditions.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Isolation, crystallization, crystal structure analysis and refinement of allophycocyanin from the cyanobacterium Spirulina platensis at 2.3 A resolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Light harvesting by phycobilisomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Stability of protein structure and hydrophobic interaction.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Dominant forces in protein folding

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Amino acid substitution matrices from protein blocks

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3166575

Phycobilisome structure and function

13 July 2018

1 reference

https://api.crossref.org/works/10.1155%2F2011%2F230236

X-ray crystallographic structure of the light-harvesting biliprotein C-phycocyanin from the thermophilic cyanobacterium Mastigocladus laminosus and its resemblance to globin structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2011%2F230236

The photosynthetic apparatus of Prochlorococcus: Insights through comparative genomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2011%2F230236

Mutual information in protein multiple sequence alignments reveals two classes of coevolving positions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2011%2F230236

Effectiveness of correlation analysis in identifying protein residues undergoing correlated evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2011%2F230236

Evolutionary analysis of phycobiliproteins: implications for their structural and functional relationships.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2011%2F230236

Structure of C-phycocyanin fromSpirulina platensisat 2.2 Å resolution: a novel monoclinic crystal form for phycobiliproteins in phycobilisomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2011%2F230236

Statistical methods for testing functional divergence after gene duplication

21 January 2018

1 reference

12 December 2020

Isolation, crystallization, crystal structure analysis and refinement of B-phycoerythrin from the red alga Porphyridium sordidum at 2.2 A resolution

1 reference

12 December 2020

Analysis of amino acid indices and mutation matrices for sequence comparison and structure prediction of proteins

1 reference

12 December 2020

1 reference

12 December 2020

Further evidence for a phycobilisome model from selective dissociation, fluorescence emission, immunoprecipitation, and electron microscopy

1 reference

12 December 2020

Evolution of the phycobiliproteins

1 reference

12 December 2020

Structure and function of chromophores in R-Phycoerythrin at 1.9 A resolution

1 reference

12 December 2020

Identifiers

DOI

10.1155/2011/230236

1 reference

7 August 2017

1 reference

7 August 2017

1 reference