Biogeography of the intestinal mucosal and lumenal microbiome in the rhesus macaque (Q35206392)

7 August 2017

Biogeography of the intestinal mucosal and lumenal microbiome in the rhesus macaque (English)

1 reference

7 August 2017

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14

Curtis Huttenhower

1 reference

7 August 2017

Xochitl C Morgan

15

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Eric J Vallender

object named as

Eric J Vallender

10

0 references

Dirk Gevers

13

object named as

Dirk Gevers

1 reference

7 August 2017

5

Eric A Franzosa

1 reference

7 August 2017

Koji Yasuda

1

1 reference

7 August 2017

Keunyoung Oh

2

1 reference

7 August 2017

Boyu Ren

3

1 reference

7 August 2017

Timothy L Tickle

4

1 reference

7 August 2017

Lynn M Wachtman

6

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7 August 2017

Andrew D Miller

7

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7 August 2017

Susan V Westmoreland

8

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7 August 2017

Keith G Mansfield

9

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7 August 2017

Gregory M Miller

11

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7 August 2017

James K Rowlett

12

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7 August 2017

26 February 2015

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7 August 2017

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17

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7 August 2017

385-391

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3

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describes a project that uses

7 August 2017

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Correlation between intraluminal oxygen gradient and radial partitioning of intestinal microbiota.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Pathogenic properties of enterohepatic Helicobacter spp. isolated from rhesus macaques with intestinal adenocarcinoma

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

The treatment-naive microbiome in new-onset Crohn's disease

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Comparison of brush and biopsy sampling methods of the ileal pouch for assessment of mucosa-associated microbiota of human subjects

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Nonhuman primate models in the genomic era: a paradigm shift.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Sympatric chimpanzees and gorillas harbor convergent gut microbial communities

13 July 2018

1 reference

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Exploring host-microbiota interactions in animal models and humans

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Distinct distal gut microbiome diversity and composition in healthy children from Bangladesh and the United States

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Identification of the Treponema pallidum subsp. pallidum TP0092 (RpoE) regulon and its implications for pathogen persistence in the host and syphilis pathogenesis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

A metagenome-wide association study of gut microbiota in type 2 diabetes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Human gut microbiome viewed across age and geography

13 July 2018

1 reference

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Structure, function and diversity of the healthy human microbiome

13 July 2018

1 reference

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Bacterial biogeography of the human digestive tract

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Obesity in rhesus and cynomolgus macaques: a comparative review of the condition and its implications for research

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

On the relationship between sialomucin and sulfomucin expression and hydrogenotrophic microbes in the human colonic mucosa

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Metagenomic biomarker discovery and explanation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

The human gut microbiome: ecology and recent evolutionary changes

13 July 2018

1 reference

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Microbial dysbiosis in colorectal cancer (CRC) patients

13 July 2018

1 reference

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Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Persistent infection of rhesus monkeys with 'Helicobacter macacae' and its isolation from an animal with intestinal adenocarcinoma

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Coupled amino acid deamidase-transport systems essential for Helicobacter pylori colonization.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

A human gut microbial gene catalogue established by metagenomic sequencing

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Human intestinal spirochetosis--a review

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Screening for colorectal cancer: a targeted, updated systematic review for the U.S. Preventive Services Task Force

13 July 2018

1 reference

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The macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis

13 July 2018

1 reference

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Oral immunization of rhesus macaques with adenoviral HIV vaccines using enteric-coated capsules.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Isolation and characterization of a novel helicobacter species, "Helicobacter macacae," from rhesus monkeys with and without chronic idiopathic colitis

13 July 2018

1 reference

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Mucosa-associated bacterial diversity in relation to human terminal ileum and colonic biopsy samples

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrate-producing bacteria in feces

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

UniFrac: a new phylogenetic method for comparing microbial communities

13 July 2018

1 reference

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Diversity of the human intestinal microbial flora

13 July 2018

1 reference

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High prevalence of adherent-invasive Escherichia coli associated with ileal mucosa in Crohn’s disease

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Helicobacter canadensis sp. nov. isolated from humans with diarrhea as an example of an emerging pathogen

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Structural and functional analysis of the riboflavin synthesis genes encoding GTP cyclohydrolase II (ribA), DHBP synthase (ribBA), riboflavin synthase (ribC), and riboflavin deaminase/reductase (ribD) from Helicobacter pylori strain P1.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Neelaredoxin, an iron-binding protein from the syphilis spirochete, Treponema pallidum, is a superoxide reductase.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4369771

Transport of glucose by a phosphoenolpyruvate:mannose phosphotransferase system in Pasteurella multocida

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25732063

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Amino acid utilisation and deamination of glutamine and asparagine by Helicobacter pylori

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25732063

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CHOM.2015.01.015

1 reference

7 August 2017

1 reference

7 August 2017

1 reference