Evolution of the CRISPR-Cas adaptive immunity systems in prokaryotes: models and observations on virus-host coevolution (Q35265236)

21 June 2018

review article

1 reference

title

Evolution of the CRISPR-Cas adaptive immunity systems in prokaryotes: models and observations on virus-host coevolution (English)

1 reference

21 June 2018

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1

Eugene V Koonin

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21 June 2018

2

Yuri I Wolf

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21 June 2018

19 September 2014

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21 June 2018

published in

Molecular BioSystems

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21 June 2018

volume

11

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21 June 2018

issue

1

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21 June 2018

page(s)

20-27

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21 June 2018

CRISPR-induced distributed immunity in microbial populations.

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27 July 2018

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Persisting viral sequences shape microbial CRISPR-based immunity

27 July 2018

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27 July 2018

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CRISPR-Cas systems in bacteria and archaea: versatile small RNAs for adaptive defense and regulation

27 July 2018

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Targeted bacterial immunity buffers phage diversity

27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

27 July 2018

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27 July 2018

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A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

27 July 2018

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Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

1 reference

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Evolutionary causes and consequences of diversified CRISPR immune profiles in natural populations.

26 September 2018

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26 September 2018

1 reference

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26 September 2018

1 reference

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A CRISPR view of genome sequences.

26 September 2018

1 reference

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Probabilistic models for CRISPR spacer content evolution

26 September 2018

1 reference

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Strong bias in the bacterial CRISPR elements that confer immunity to phage.

26 September 2018

1 reference

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RNA-guided editing of bacterial genomes using CRISPR-Cas systems

26 September 2018

1 reference

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RNA processing enables predictable programming of gene expression

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

CRISPR interference can prevent natural transformation and virulence acquisition during in vivo bacterial infection.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

CRISPR transcript processing: a mechanism for generating a large number of small interfering RNAs

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

The highly dynamic CRISPR1 system of Streptococcus agalactiae controls the diversity of its mobilome.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

RNA-guided genetic silencing systems in bacteria and archaea

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

Nasty Viruses, Costly Plasmids, Population Dynamics, and the Conditions for Establishing and Maintaining CRISPR-Mediated Adaptive Immunity in Bacteria

26 September 2018

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Multidrug-resistant enterococci lack CRISPR-cas

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

Heterogeneous diversity of spacers within CRISPR (clustered regularly interspaced short palindromic repeats).

26 September 2018

1 reference

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Lactococcal abortive infection protein AbiV interacts directly with the phage protein SaV and prevents translation of phage proteins

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

Comparative network clustering of direct repeats (DRs) and cas genes confirms the possibility of the horizontal transfer of CRISPR locus among bacteria.

26 September 2018

1 reference

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26 September 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

The great billion-year war between ribosome- and capsid-encoding organisms (cells and viruses) as the major source of evolutionary novelties

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

Comparative analysis of CRISPR loci in lactic acid bacteria genomes.

26 September 2018

1 reference

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Pathogen recognition and innate immunity

26 September 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5875448

26 September 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/25238531

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1039/C4MB00438H

1 reference

21 June 2018

PMC publication ID

5875448

1 reference

21 June 2018

PubMed publication ID

25238531

1 reference

21 June 2018