Computational Biology of Olfactory Receptors (Q35276972)

7 August 2017

title

Computational Biology of Olfactory Receptors (English)

1 reference

7 August 2017

main subject

computational biology

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author name string

Chiquito J Crasto

series ordinal

1

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7 August 2017

publication date

1 January 2009

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7 August 2017

published in

Current Bioinformatics

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7 August 2017

volume

4

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7 August 2017

issue

1

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7 August 2017

page(s)

8-15

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An olfactory receptor pseudogene whose function emerged in humans: a case study in the evolution of structure-function in GPCRs.

7 August 2017

cites work

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High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor

27 July 2018

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Crystal structure of the human beta2 adrenergic G-protein-coupled receptor

27 July 2018

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Extensive gains and losses of olfactory receptor genes in mammalian evolution

27 July 2018

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Ancient genomic architecture for mammalian olfactory receptor clusters

27 July 2018

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The dog and rat olfactory receptor repertoires

27 July 2018

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Functional characterization of two human olfactory receptors expressed in the baculovirus Sf9 insect cell system.

27 July 2018

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Test of the Binding Threshold Hypothesis for olfactory receptors: explanation of the differential binding of ketones to the mouse and human orthologs of olfactory receptor 912-93.

27 July 2018

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Structural basis for a broad but selective ligand spectrum of a mouse olfactory receptor: mapping the odorant-binding site.

27 July 2018

1 reference

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Comparative evolutionary analysis of olfactory receptor gene clusters between humans and mice

27 July 2018

1 reference

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The olfactory receptor universe--from whole genome analysis to structure and evolution.

27 July 2018

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A comparison of the human and chimpanzee olfactory receptor gene repertoires

27 July 2018

1 reference

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Identification of specific ligands for orphan olfactory receptors. G protein-dependent agonism and antagonism of odorants

27 July 2018

1 reference

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X-ray crystallographic studies for ligand-protein interaction changes in rhodopsin

27 July 2018

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Making sense of olfaction through predictions of the 3-D structure and function of olfactory receptors

27 July 2018

1 reference

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First principles predictions of the structure and function of g-protein-coupled receptors: validation for bovine rhodopsin.

27 July 2018

1 reference

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Odorant receptor gene choice in olfactory sensory neurons: the one receptor-one neuron hypothesis revisited

27 July 2018

1 reference

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The human olfactory receptor gene family

27 July 2018

1 reference

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Predicted 3D structure for the human beta 2 adrenergic receptor and its binding site for agonists and antagonists

27 July 2018

1 reference

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HierVLS hierarchical docking protocol for virtual ligand screening of large-molecule databases.

27 July 2018

1 reference

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Prediction of the odorant binding site of olfactory receptor proteins by human-mouse comparisons

27 July 2018

1 reference

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Is the olfactory receptor a metalloprotein?

27 July 2018

1 reference

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Prediction of structure and function of G protein-coupled receptors

27 July 2018

1 reference

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The olfactory receptor family album

27 July 2018

1 reference

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The HMMTOP transmembrane topology prediction server

27 July 2018

1 reference

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Evaluation of methods for the prediction of membrane spanning regions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

The human olfactory receptor repertoire

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

The complete human olfactory subgenome

27 July 2018

1 reference

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Molecular mechanisms underlying differential odor responses of a mouse olfactory receptor

27 July 2018

1 reference

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Analysis of the molecular basis for octanal interactions in the expressed rat 17 olfactory receptor

27 July 2018

1 reference

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Molecular biology of odorant receptors in vertebrates

27 July 2018

1 reference

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Combinatorial receptor codes for odors

27 July 2018

1 reference

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Identification of olfactory receptor mRNA sequences from the rat olfactory bulb glomerular layer

27 July 2018

1 reference

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A hidden Markov model for predicting transmembrane helices in protein sequences

27 July 2018

1 reference

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Olfaction in neurodegenerative disease: a meta-analysis of olfactory functioning in Alzheimer's and Parkinson's diseases

27 July 2018

1 reference

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Positive selection moments identify potential functional residues in human olfactory receptors.

27 July 2018

1 reference

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Comparative protein modelling by satisfaction of spatial restraints

27 July 2018

1 reference

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A geometric approach to macromolecule-ligand interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

A simple method for displaying the hydropathic character of a protein

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Three-dimensional structure of membrane and surface proteins

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

A molecular theory of lipid-protein interactions in the plasma lipoproteins

27 July 2018

1 reference

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WHAT IF: a molecular modeling and drug design program

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

A novel multigene family may encode odorant receptors: a molecular basis for odor recognition

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Olfactory impairment in motor neuron disease: a pilot study

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

An introduction to hidden Markov models

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

A framework for exploring functional variability in olfactory receptor genes

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

The molecular basis for ligand specificity in a mouse olfactory receptor: a network of functionally important residues

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Role of the retinal hydrogen bond network in rhodopsin Schiff base stability and hydrolysis

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

A molecular basis for odorant recognition: olfactory receptor pharmacology

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Predicted 3-D structures for mouse I7 and rat I7 olfactory receptors and comparison of predicted odor recognition profiles with experiment

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

The predicted 3D structure of the human D2 dopamine receptor and the binding site and binding affinities for agonists and antagonists.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

The canine olfactory subgenome

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

The mouse olfactory receptor gene family

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

The olfactory receptor gene superfamily of the mouse

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Olfactory Receptor Database: a metadata-driven automated population from sources of gene and protein sequences

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Olfactory identification in elderly schizophrenia and Alzheimer's disease

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Signal transduction: The rhodopsin story continued

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187719

Longitudinal analysis of olfactory deficits in HIV infection

8 December 2018

1 reference

12 December 2020

Olfactory Dysfunction in Parkinson’s Disease

1 reference

12 December 2020

Potential ligand-binding residues in rat olfactory receptors identified by correlated mutation analysis

1 reference

12 December 2020

Olfactory dysfunction in anorexia and bulimia nervosa

1 reference

12 December 2020

Transmembrane topology prediction methods: a re-assessment and improvement by a consensus method using a dataset of experimentally-characterized transmembrane topologies

1 reference

12 December 2020

The prediction and orientation of α-helices from sequence alignments: the combined use of environment-dependent substitution tables, Fourier transform methods and helix capping rules

1 reference

12 December 2020

The molecular receptive range of an odorant receptor

1 reference

12 December 2020

Structural activation pathways from dynamic olfactory receptor-odorant interactions

1 reference

12 December 2020

Olfactory receptors guide axons

1 reference

12 December 2020

10.2174/157489309787158143

Identifiers

DOI

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7 August 2017

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7 August 2017

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