HSA21 Single-Minded 2 (Sim2) Binding Sites Co-Localize with Super-Enhancers and Pioneer Transcription Factors in Pluripotent Mouse ES Cells (Q35586949)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

title

HSA21 Single-Minded 2 (Sim2) Binding Sites Co-Localize with Super-Enhancers and Pioneer Transcription Factors in Pluripotent Mouse ES Cells (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference

1 reference

2

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7 March 2020

Federico A Santoni

4

1 reference

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7 March 2020

Piero Carninci

10

1 reference

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7 March 2020

11

Christelle Borel

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

7

Pascale Ribaux

1 reference

7 March 2020

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

5

Marco Garieri

1 reference

7 March 2020

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

6

Emilie Falconnet

1 reference

7 March 2020

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

Audrey Letourneau

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Alexandre Fort

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Anne Vannier

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Michel Guipponi

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Stylianos E Antonarakis

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

language of work or name

English

0 references

publication date

8 May 2015

1 reference

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7 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

volume

10

1 reference

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7 March 2020

issue

5

1 reference

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7 March 2020

page(s)

e0126475

1 reference

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Creative Commons Attribution 4.0 International

7 March 2020

copyright license

start time

8 May 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

edgeR

object named as

EdgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Epigenetic switch involved in activation of pioneer factor FOXA1-dependent enhancers

12 July 2018

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12 July 2018

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A mouse embryonic stem cell bank for inducible overexpression of human chromosome 21 genes

12 July 2018

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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

12 July 2018

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OTX2 microphthalmia syndrome: four novel mutations and delineation of a phenotype

12 July 2018

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Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencing

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Inhibition of breast cancer growth and invasion by single-minded 2s.

12 July 2018

1 reference

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Transcriptional dysregulation in Down syndrome: predictions for altered protein complex stoichiometries and post-translational modifications, and consequences for learning/behavior genes ELK, CREB, and the estrogen and glucocorticoid receptors

12 July 2018

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

12 July 2018

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Inhibition of Single Minded 2 gene expression mediates tumor-selective apoptosis and differentiation in human colon cancer cells

12 July 2018

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An efficient system to establish multiple embryonic stem cell lines carrying an inducible expression unit

12 July 2018

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Chromosome 21 and down syndrome: from genomics to pathophysiology

12 July 2018

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12 July 2018

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Down's syndrome-associated single minded gene as a novel tumor marker

12 July 2018

1 reference

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Craniofacial abnormalities resulting from targeted disruption of the murine Sim2 gene

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Sim2 mutants have developmental defects not overlapping with those of Sim1 mutants

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Circadian rhythms from flies to human

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Essential roles in synaptic plasticity for synaptogyrin I and synaptophysin I

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Mild impairment of learning and memory in mice overexpressing the mSim2 gene located on chromosome 16: an animal model of Down's syndrome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Cloning of two human homologs of the Drosophila single-minded gene SIM1 on chromosome 6q and SIM2 on 21q within the Down syndrome chromosomal region

12 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

12 July 2018

https://pubmed.ncbi.nlm.nih.gov/25955728

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Alternate functions of the single-minded and rhomboid genes in development of the Drosophila ventral neuroectoderm.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

"Expression patterns of two murine homologs of Drosophila single-minded suggest possible roles in embryonic patterning and in the pathogenesis of Down syndrome.".

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Characterization of msim, a murine homologue of the Drosophila sim transcription factor.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

The mammalian single-minded (SIM) gene: mouse cDNA structure and diencephalic expression indicate a candidate gene for Down syndrome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

cDNA cloning of a murine homologue of Drosophila single-minded, its mRNA expression in mouse development, and chromosome localization.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Down syndrome-critical region contains a gene homologous to Drosophila sim expressed during rat and human central nervous system development

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Molecular genetics of the single-minded locus: a gene involved in the development of the Drosophila nervous system

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

The single-minded gene of Drosophila is required for the expression of genes important for the development of CNS midline cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

The Drosophila single-minded gene encodes a helix-loop-helix protein that acts as a master regulator of CNS midline development

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

OTX2 mutations contribute to the otocephaly-dysgnathia complex.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Single minded 2-s (SIM2-s) gene is expressed in human GBM cells and involved in GBM invasion.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Effects of overexpression of Sim2 on spatial memory and expression of synapsin I in rat hippocampus.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Spatial and temporal localization during embryonic and fetal human development of the transcription factor SIM2 in brain regions altered in Down syndrome

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Functional interactions between Drosophila bHLH/PAS, Sox, and POU transcription factors regulate CNS midline expression of the slit gene.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Control of cell lineage-specific development and transcription by bHLH-PAS proteins

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

The Drosophila tango gene encodes a bHLH-PAS protein that is orthologous to mammalian Arnt and controls CNS midline and tracheal development

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4425456

Mouse Otx2 functions in the formation and patterning of rostral head.

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0126475

Mice trisomic for a bacterial artificial chromosome with the single-minded 2 gene (Sim2) show phenotypes similar to some of those present in the partial trisomy 16 mouse models of Down syndrome

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0126475

Drosophila single-minded represses gene transcription by activating the expression of repressive factors

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25955728

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0126475

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25955728%20AND%20SRC:MED&resulttype=core&format=json