5'- and 3'-noncoding regions in flavivirus RNA. (Q35616820)

9 August 2017

2 references

22 October 2022

5'- and 3'-noncoding regions in flavivirus RNA. (English)

1 reference

9 August 2017

Lewis Markoff

1

1 reference

9 August 2017

publication date

1 January 2003

1 reference

Advances in Virus Research

9 August 2017

published in

2 references

9 August 2017

22 October 2022

59

1 reference

9 August 2017

page(s)

177-228

1 reference

Vertebrate mRNAs with a 5'-terminal pyrimidine tract are candidates for translational repression in quiescent cells: characterization of the translational cis-regulatory element.

9 August 2017

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Picornavirus IRESes and the poly(A) tail jointly promote cap-independent translation in a mammalian cell-free system

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Host factors involved in West Nile virus replication.

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7 January 2021

Sequence and secondary structure analysis of the 5'-terminal region of flavivirus genome RNA.

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7 January 2021

The 3'-nucleotides of flavivirus genomic RNA form a conserved secondary structure

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7 January 2021

Secondary structure of the 5' nontranslated regions of hepatitis C virus and pestivirus genomic RNAs

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7 January 2021

Growth-restricted dengue virus mutants containing deletions in the 5' noncoding region of the RNA genome

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7 January 2021

Antigenic relationships between flaviviruses as determined by cross-neutralization tests with polyclonal antisera

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7 January 2021

The complete nucleotide sequence of cell fusing agent (CFA): homology between the nonstructural proteins encoded by CFA and the nonstructural proteins encoded by arthropod-borne flaviviruses

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7 January 2021

Flavivirus genome organization, expression, and replication

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7 January 2021

Mutations in the NS3 gene and 3'-NCR of Japanese encephalitis virus isolated from an unconventional ecosystem and implications for natural attenuation of the virus

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7 January 2021

Replication strategy of Kunjin virus: evidence for recycling role of replicative form RNA as template in semiconservative and asymmetric replication

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7 January 2021

Characterization of Kunjin virus RNA-dependent RNA polymerase: reinitiation of synthesis in vitro

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7 January 2021

Methylation status of intracellular dengue type 2 40 S RNA

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7 January 2021

RNA polymerase of vesicular stomatitis virus specifically associates with translation elongation factor-1 alphabetagamma for its activity

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7 January 2021

5' and 3' untranslated regions of pestivirus genome: primary and secondary structure analyses

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7 January 2021

Mutational analysis of the sequence and structural requirements in brome mosaic virus RNA for minus strand promoter activity

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7 January 2021

Attenuation and immunogenicity in humans of a live dengue virus type-4 vaccine candidate with a 30 nucleotide deletion in its 3'-untranslated region.

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7 January 2021

Biophysical studies on circle formation by Sindbis virus 49 S RNA

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7 January 2021

Complete 5' noncoding region is necessary for the efficient internal initiation of hepatitis C virus RNA.

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7 January 2021

Three different cellular proteins bind to complementary sites on the 5'-end-positive and 3'-end-negative strands of mouse hepatitis virus RNA.

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https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

12 December 2020

Complete sequence of two tick-borne flaviviruses isolated from Siberia and the UK: analysis and significance of the 5' and 3'-UTRs

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7 January 2021

Development of a virus-resistant inbred mouse strain for the study of innate resistance to Arbo B viruses

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Conserved elements in the 3' untranslated region of flavivirus RNAs and potential cyclization sequences

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https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Poliovirus RNA replication requires genome circularization through a protein-protein bridge

1 reference

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7 January 2021

Structural Features that Give Rise to the Unusual Stability of RNA Hairpins Containing GNRA Loops

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7 January 2021

An Electron Microscope Study of Sindbis Virus RNA

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7 January 2021

Heterogeneous nuclear ribonucleoprotein a1 binds to the 3'-untranslated region and mediates potential 5'-3'-end cross talks of mouse hepatitis virus RNA.

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7 January 2021

Mutations in the central polypurine tract of HIV-1 result in delayed replication

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7 January 2021

Sequence analysis of cloned dengue virus type 2 genome (New Guinea-C strain).

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https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Essential role of cyclization sequences in flavivirus RNA replication

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https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

A long-range pseudoknot in Qbeta RNA is essential for replication

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7 January 2021

Computer-assisted identification of a putative methyltransferase domain in NS5 protein of flaviviruses and lambda 2 protein of reovirus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

The 3' stem loop of the West Nile virus genomic RNA can suppress translation of chimeric mRNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Cellular proteins bind to the poly(U) tract of the 3' untranslated region of hepatitis C virus RNA genome

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Subcellular localization and some biochemical properties of the flavivirus Kunjin nonstructural proteins NS2A and NS4A.

1 reference

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7 January 2021

Infectious cDNA clones of tick-borne encephalitis virus European subtype prototypic strain Neudoerfl and high virulence strain Hypr

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7 January 2021

Complete genomic sequence of Powassan virus: evaluation of genetic elements in tick-borne versus mosquito-borne flaviviruses

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7 January 2021

Derivation and characterization of a dengue type 1 host range-restricted mutant virus that is attenuated and highly immunogenic in monkeys

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7 January 2021

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

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7 January 2021

Flavivirus infection: essential ultrastructural changes and association of Kunjin virus NS3 protein with microtubules

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7 January 2021

A new principle of RNA folding based on pseudoknotting

1 reference

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7 January 2021

Infectious cDNA clone of attenuated Langat tick-borne flavivirus (strain E5) and a 3' deletion mutant constructed from it exhibit decreased neuroinvasiveness in immunodeficient mice

1 reference

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7 January 2021

Construction of regulatable picornavirus IRESes as a test of current models of the mechanism of internal translation initiation

1 reference

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7 January 2021

Secondary structure of the 3'-untranslated region of yellow fever virus: implications for virulence, attenuation and vaccine development

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Secondary structure of the 3' untranslated region of flaviviruses: similarities and differences

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Biological consequences of deletions within the 3'-untranslated region of flaviviruses may be due to rearrangements of RNA secondary structure

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Terminal nucleotidyl transferase activity of recombinant Flaviviridae RNA-dependent RNA polymerases: implication for viral RNA synthesis

1 reference

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7 January 2021

Genetic stability of Sabin 1 strain of poliovirus: implications for quality control of oral poliovirus vaccine

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Nucleotide sequence of yellow fever virus: implications for flavivirus gene expression and evolution

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Multiple repeating motifs are found in the 3'-terminal non-translated region of Semliki Forest virus A7 variant genome.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Specific interaction of glyceraldehyde 3-phosphate dehydrogenase with the 5'-nontranslated RNA of hepatitis A virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Evidence for the Existence of a Pseudoknot Structure at the 3‘ Terminus of the Flavivirus Genomic RNA †

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Host protein interactions with the 3' end of bovine coronavirus RNA and the requirement of the poly(A) tail for coronavirus defective genome replication

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Poly(C)-binding protein interacts with the hepatitis C virus 5' untranslated region

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Mov34 protein from mouse brain interacts with the 3' noncoding region of Japanese encephalitis virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Recombinant dengue type 1 virus NS5 protein expressed in Escherichia coli exhibits RNA-dependent RNA polymerase activity

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Identification and characterization of the RNA helicase activity of Japanese encephalitis virus NS3 protein

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

The flavivirus 3'-noncoding region: extensive size heterogeneity independent of evolutionary relationships among strains of tick-borne encephalitis virus

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Genetic variation in yellow fever virus: duplication in the 3' noncoding region of strains from Africa

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Analysis of structural properties which possibly are characteristic for the 3'-terminal sequence of the genome RNA of flaviviruses

1 reference

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7 January 2021

Terminal sequences of the genome and replicatioe-form RNA of the flavivirus west nile virus: absence of poly(A) and possible role in RNA replication

1 reference

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7 January 2021

The carboxy-terminal part of the NS 3 protein of the West Nile Flavivirus can be isolated as a soluble protein after proteolytic cleavage and represents an RNA-stimulated NTPase

1 reference

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7 January 2021

Nascent flavivirus RNA colocalized in situ with double-stranded RNA in stable replication complexes

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

The conformation of loop E of eukaryotic 5S ribosomal RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Functional significance of the interaction of hepatitis A virus RNA with glyceraldehyde 3-phosphate dehydrogenase (GAPDH): opposing effects of GAPDH and polypyrimidine tract binding protein on internal ribosome entry site function

1 reference

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7 January 2021

In vitro RNA synthesis from exogenous dengue viral RNA templates requires long range interactions between 5'- and 3'-terminal regions that influence RNA structure

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

A novel in vitro replication system for Dengue virus. Initiation of RNA synthesis at the 3'-end of exogenous viral RNA templates requires 5'- and 3'-terminal complementary sequence motifs of the viral RNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0065-3527%2803%2959006-6

7 January 2021

Secondary structure of the 3'-noncoding region of flavivirus genomes: comparative analysis of base pairing probabilities

1 reference

12 December 2020

Mutagenesis of the yellow fever virus NS2B protein: effects on proteolytic processing, NS2B-NS3 complex formation, and viral replication

1 reference

12 December 2020

Circular forms of Uukuniemi virion RNA: an electron microscopic study

1 reference

12 December 2020

Multiple binding sites for cellular proteins in the 3' end of Sindbis alphavirus minus-sense RNA

1 reference

12 December 2020

Spontaneous and engineered deletions in the 3' noncoding region of tick-borne encephalitis virus: construction of highly attenuated mutants of a flavivirus

1 reference

12 December 2020

Function and structure in phage Qbeta RNA replicase. Association of EF-Tu-Ts with the other enzyme subunits

1 reference

12 December 2020

Specific binding of host cell proteins to the 3'-terminal stem-loop structure of rubella virus negative-strand RNA

1 reference

12 December 2020

Hypoxia stimulates binding of a cytoplasmic protein to a pyrimidine-rich sequence in the 3'-untranslated region of rat tyrosine hydroxylase mRNA.

1 reference

12 December 2020

trans-Complementation of yellow fever virus NS1 reveals a role in early RNA replication

1 reference

12 December 2020

BHK cell proteins that bind to the 3' stem-loop structure of the West Nile virus genome RNA

1 reference

12 December 2020

Subgenomic replicons of the flavivirus Kunjin: construction and applications

1 reference

12 December 2020

Dengue type 4 virus mutants containing deletions in the 3' noncoding region of the RNA genome: analysis of growth restriction in cell culture and altered viremia pattern and immunogenicity in rhesus monkeys

1 reference

12 December 2020

Secondary structure determination of the conserved 98-base sequence at the 3' terminus of hepatitis C virus genome RNA

1 reference

12 December 2020

Modulations of the in vitro translational efficiencies of Yellow Fever virus mRNAs: interactions between coding and noncoding regions.

1 reference

12 December 2020

Translation elongation factor-1 alpha interacts with the 3' stem-loop region of West Nile virus genomic RNA

1 reference

12 December 2020

An RNA pseudoknot is an essential structural element of the internal ribosome entry site located within the hepatitis C virus 5' noncoding region

1 reference

12 December 2020

Genetic analysis of the yellow fever virus NS1 protein: identification of a temperature-sensitive mutation which blocks RNA accumulation

1 reference

12 December 2020

Presence of poly(A) in a flavivirus: significant differences between the 3' noncoding regions of the genomic RNAs of tick-borne encephalitis virus strains

1 reference

12 December 2020

Infectious RNA transcripts from full-length dengue virus type 2 cDNA clones made in yeast

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12 December 2020

Both nonstructural proteins NS2B and NS3 are required for the proteolytic processing of dengue virus nonstructural proteins

1 reference

12 December 2020

Sequence comparison and secondary structure analysis of the 3' noncoding region of flavivirus genomes reveals multiple pseudoknots.

1 reference

12 December 2020

Specific high-affinity binding of host cell proteins to the 3' region of rubella virus RNA.

1 reference

12 December 2020

RNA-stimulated NTPase activity associated with yellow fever virus NS3 protein expressed in bacteria

1 reference

12 December 2020

RNA-protein interactions: involvement of NS3, NS5, and 3' noncoding regions of Japanese encephalitis virus genomic RNA

1 reference

12 December 2020

Cell proteins bind to sites within the 3' noncoding region and the positive-strand leader sequence of measles virus RNA

1 reference

12 December 2020

Identification of specific nucleotide sequences within the conserved 3'-SL in the dengue type 2 virus genome required for replication

1 reference

12 December 2020

Genetic interaction of flavivirus nonstructural proteins NS1 and NS4A as a determinant of replicase function.

1 reference

12 December 2020

Cell proteins bind specifically to West Nile virus minus-strand 3' stem-loop RNA

1 reference

12 December 2020

Phylogeny of the genus Flavivirus

1 reference

12 December 2020

Biochemical and genetic evidence for a pseudoknot structure at the 3' terminus of the poliovirus RNA genome and its role in viral RNA amplification

1 reference

12 December 2020

10.1016/S0065-3527(03)59006-6

Identifiers

DOI

1 reference

9 August 2017

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