Regulation of yeast oscillatory dynamics (Q35629119)

9 August 2017

Regulation of yeast oscillatory dynamics (English)

1 reference

9 August 2017

Douglas B Murray

1

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9 August 2017

Manfred Beckmann

series ordinal

2

1 reference

9 August 2017

Hiroaki Kitano

series ordinal

3

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9 August 2017

language of work or name

English

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publication date

6 February 2007

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Proceedings of the National Academy of Sciences of the United States of America

9 August 2017

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9 August 2017

104

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9 August 2017

7

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9 August 2017

2241-2246

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describes a project that uses

9 August 2017

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

cites work

Noise-resistant and synchronized oscillation of the segmentation clock.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Network motifs: structure does not determine function

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

The temporal architecture of eukaryotic growth

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Translational regulation of GCN4 and the general amino acid control of yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

MAVisto: a tool for the exploration of network motifs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

T-profiler: scoring the activity of predefined groups of genes using gene expression data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Ultradian metronome: timekeeper for orchestration of cellular coherence.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

The F-box protein Met30 is required for multiple steps in the budding yeast cell cycle

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Structure theorems and the dynamics of nitrogen catabolite repression in yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Cellular oscillators: rhythmic gene expression and metabolism

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Cbf1p is required for chromatin remodeling at promoter-proximal CACGTG motifs in yeast.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

A genomewide oscillation in transcription gates DNA replication and cell cycle

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Cytoscape: a software environment for integrated models of biomolecular interaction networks

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Network motifs: simple building blocks of complex networks

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Clock control of ultradian respiratory oscillation found during yeast continuous culture

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Ultradian metabolic oscillation of Saccharomyces cerevisiae during aerobic continuous culture: hydrogen sulphide, a population synchronizer, is produced by sulphite reductase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Sok2 regulates yeast pseudohyphal differentiation via a transcription factor cascade that regulates cell-cell adhesion

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Regulation of transcription by ubiquitination without proteolysis: Cdc34/SCF(Met30)-mediated inactivation of the transcription factor Met4.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Yeast PKA represses Msn2p/Msn4p-dependent gene expression to regulate growth, stress response and glycogen accumulation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Metabolism of sulfur amino acids in Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Energetics of the budding cycle of Saccharomyces cerevisiae during glucose limited aerobic growth

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes.

27 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Generation and maintenance of synchrony in Saccharomyces cerevisiae continuous culture

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Target hub proteins serve as master regulators of development in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

The role of amino acids in the regulation of hydrogen sulfide production during ultradian respiratory oscillation of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Induction of pseudohyphal growth by overexpression of PHD1, a Saccharomyces cerevisiae gene related to transcriptional regulators of fungal development

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Sok2p transcription factor is involved in adaptive program relevant for long term survival of Saccharomyces cerevisiae colonies

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Coordinate regulation of multiple and distinct biosynthetic pathways by TOR and PKA kinases in S. cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Cyclic AMP-independent regulation of protein kinase A substrate phosphorylation by Kelch repeat proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Mathematical analysis of a mechanism for autonomous metabolic oscillations in continuous culture of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Cycles of mitochondrial energization driven by the ultradian clock in a continuous culture of Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606677104

Regulation of branched-chain, and sulfur-containing amino acid metabolism by glutathione during ultradian metabolic oscillation of Saccharomyces cerevisiae.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794218

Ultradian oscillation of Saccharomyces cerevisiae during aerobic continuous culture: hydrogen sulphide mediates population synchrony

25 September 2018

1 reference

12 December 2020

Oscillatory metabolism of Saccharomyces cerevisiae in continuous culture

1 reference

12 December 2020

The general amino acid control regulates MET4, which encodes a methionine-pathway-specific transcriptional activator of Saccharomyces cerevisiae

1 reference

12 December 2020

Synchronization affector of autonomous short-period-sustained oscillation of Saccharomyces cerevisiae

1 reference

12 December 2020

Autonomous metabolic oscillation in continuous culture of Saccharomyces cerevisiae grown on ethanol

1 reference

12 December 2020

NO+, but not NO., inhibits respiratory oscillations in ethanol-grown chemostat cultures of Saccharomyces cerevisiae

1 reference

12 December 2020

YAP4 gene expression is induced in response to several forms of stress in Saccharomyces cerevisiae

1 reference

12 December 2020

A potential mechanism of energy-metabolism oscillation in an aerobic chemostat culture of the yeast Saccharomyces cerevisiae

1 reference

12 December 2020

Involvement of glutathione in the regulation of respiratory oscillation during a continuous culture of Saccharomyces cerevisiae

1 reference

12 December 2020

Life before the clock: modeling circadian evolution

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0606677104

1 reference

9 August 2017

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9 August 2017

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