GeneSigDB: a manually curated database and resource for analysis of gene expression signatures (Q35630836)

9 August 2017

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures (English)

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manually curated database

9 August 2017

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1 reference

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7

Benjamin Haibe-Kains

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John Quackenbush

16

John Quackenbush

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Daniel Gusenleitner

12

Daniel Gusenleitner

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Aedin C Culhane

Aedín C Culhane

1

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Razvan Sultana

3

Razvan Sultana

1 reference

9 August 2017

11

Kermshlise C Picard

1 reference

9 August 2017

4

Shaita C Picard

1 reference

9 August 2017

13

Gerald Papenhausen

1 reference

9 August 2017

15

Mick Correll

1 reference

9 August 2017

Markus S Schröder

2

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9 August 2017

Enzo N Martinelli

5

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9 August 2017

Caroline Kelly

6

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9 August 2017

Misha Kapushesky

8

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9 August 2017

Anne-Alyssa St Pierre

9

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9 August 2017

William Flahive

10

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9 August 2017

Niall O'Connor

14

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9 August 2017

language of work or name

English

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publication date

21 November 2011

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9 August 2017

Nucleic Acids Research

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9 August 2017

40

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9 August 2017

Database issue

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9 August 2017

D1060-6

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Creative Commons Attribution-NonCommercial 3.0 Unported

9 August 2017

start time

12 May 2017

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Molecular signatures database (MSigDB) 3.0.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Combining gene signatures improves prediction of breast cancer survival

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Building prognostic models for breast cancer patients using clinical variables and hundreds of gene expression signatures.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

NCBI GEO: archive for functional genomics data sets--10 years on

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Reactome: a database of reactions, pathways and biological processes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Systems biology and genomics of breast cancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

CCancer: a bird's eye view on gene lists reported in cancer-related studies

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Multidimensional gene set analysis of genomic data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Web-based interrogation of gene expression signatures using EXALT.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

GeneSigDB--a curated database of gene expression signatures

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Gene expression atlas at the European bioinformatics institute

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

The Gene Ontology's Reference Genome Project: a unified framework for functional annotation across species

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Identifying relationships among genomic disease regions: predicting genes at pathogenic SNP associations and rare deletions

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

BioMart Central Portal--unified access to biological data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Gene set enrichment in eQTL data identifies novel annotations and pathway regulators

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

From genes to functional classes in the study of biological systems

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Analyzing gene expression data in terms of gene sets: methodological issues

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Mutational analysis of gene families in human cancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

Mistaken identifiers: gene name errors can be introduced inadvertently when using Excel in bioinformatics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245038

12 July 2018

Identifiers

DOI

10.1093/NAR/GKR901

1 reference

journals/nar/CulhaneSSPMKHKPFPGPOCQ12

9 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

9 August 2017

1 reference