Multicenter Comparison of Lung and Oral Microbiomes of HIV-infected and HIV-uninfected Individuals (Q35738797)

10 August 2017

title

Multicenter Comparison of Lung and Oral Microbiomes of HIV-infected and HIV-uninfected Individuals (English)

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multicenter clinical trial

10 August 2017

main subject

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23

Erica Sodergren

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Patrick D. Schloss

Patrick D Schloss

2

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Thomas M. Schmidt

Thomas M Schmidt

22

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Kristina Crothers

Kristina Crothers

10

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Jeffrey L. Curtis

Jeffrey L Curtis

11

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George Weinstock

George M Weinstock

24

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Elodie Ghedin

17

Elodie Ghedin

1 reference

10 August 2017

3

Arvind Venkataraman

1 reference

10 August 2017

19

Susan V Lynch

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Lung HIV Microbiome Project

10 August 2017

26

Lung HIV Microbiome Project

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10 August 2017

8

Emily S Charlson

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10 August 2017

James M Beck

1

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10 August 2017

Homer Twigg

4

1 reference

10 August 2017

Kathleen A Jablonski

5

1 reference

10 August 2017

Frederic D Bushman

6

1 reference

10 August 2017

Thomas B Campbell

7

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10 August 2017

Ronald G Collman

9

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10 August 2017

Kimberly L Drews

12

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10 August 2017

Sonia C Flores

13

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10 August 2017

Andrew P Fontenot

14

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10 August 2017

Mary A Foulkes

15

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10 August 2017

Ian Frank

16

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10 August 2017

Laurence Huang

18

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10 August 2017

Alison Morris

20

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10 August 2017

Brent E Palmer

21

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10 August 2017

Vincent B Young

25

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10 August 2017

language of work or name

English

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publication date

6 August 2015

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American Journal of Respiratory and Critical Care Medicine

10 August 2017

published in

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10 August 2017

volume

192

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10 August 2017

issue

11

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10 August 2017

page(s)

1335-1344

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Changes in the lung microbiome following lung transplantation include the emergence of two distinct Pseudomonas species with distinct clinical associations

10 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

The lung microbiome of Ugandan HIV-infected pneumonia patients is compositionally and functionally distinct from that of San Franciscan patients

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Dynamics and associations of microbial community types across the human body

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Bacterial microbiome of lungs in COPD

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

ABCs of the lung microbiome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Changes in cystic fibrosis airway microbiota at pulmonary exacerbation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Oral microflora and their relation to risk factors in HIV+ patients with oropharyngeal candidiasis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Asthma microbiome studies and the potential for new therapeutic strategies

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

The role of the lung microbiome in health and disease. A National Heart, Lung, and Blood Institute workshop report.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Comparison of the respiratory microbiome in healthy nonsmokers and smokers

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Widespread colonization of the lung by Tropheryma whipplei in HIV infection

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Lung microbiota and bacterial abundance in patients with bronchiectasis when clinically stable and during exacerbation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

The oral microbiome in health and disease

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Host genome, epigenome, and oral microbiome interactions: toward personalized periodontal therapy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Longitudinal analysis of the lung microbiome in lung transplantation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

The lung microbiome in moderate and severe chronic obstructive pulmonary disease

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Assessing bacterial populations in the lung by replicate analysis of samples from the upper and lower respiratory tracts

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Evidence of an increased pathogenic footprint in the lingual microbiome of untreated HIV infected patients

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Lung-enriched organisms and aberrant bacterial and fungal respiratory microbiota after lung transplant.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Oral and airway microbiota in HIV-infected pneumonia patients

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

The microbiome of the lung

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Decade-long bacterial community dynamics in cystic fibrosis airways

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

The lung tissue microbiome in chronic obstructive pulmonary disease

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Topographical continuity of bacterial populations in the healthy human respiratory tract

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Analysis of the lung microbiome in the "healthy" smoker and in COPD

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Airway microbiota and bronchial hyperresponsiveness in patients with suboptimally controlled asthma

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Analysis of the bacterial communities present in lungs of patients with cystic fibrosis from American and British centers

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

The microbiota and allergies/asthma

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

A persistent and diverse airway microbiota present during chronic obstructive pulmonary disease exacerbations.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Disordered microbial communities in asthmatic airways

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Use of bronchoalveolar lavage to assess the respiratory microbiome: signal in the noise

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

The use of culture-independent tools to characterize bacteria in endo-tracheal aspirates from pre-term infants at risk of bronchopulmonary dysplasia

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Reestablishment of Recipient-associated Microbiota in the Lung Allograft Is Linked to Reduced Risk of Bronchiolitis Obliterans Syndrome

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4731698

Role of pulmonary infection in the development of chronic lung disease of prematurity

6 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26247840

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1164/RCCM.201501-0128OC

1 reference

10 August 2017

1 reference

10 August 2017

1 reference