Generation of whole genome sequences of new Cryptosporidium hominis and Cryptosporidium parvum isolates directly from stool samples (Q35759337)

26318339

10 August 2017

title

Generation of whole genome sequences of new Cryptosporidium hominis and Cryptosporidium parvum isolates directly from stool samples (English)

1 reference

10 August 2017

0 references

Cryptosporidium hominis

1 reference

based on heuristic

inferred from title

Cryptosporidium parvum

object named as

Cryptosporidium parvum

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Simon J S Cameron

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

author name string

Stephen J Hadfield

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Martin T Swain

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Guy Robinson

4

1 reference

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1 June 2020

Jenna Alexander

6

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Matthew J Hegarty

7

1 reference

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1 June 2020

Kristin Elwin

8

1 reference

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1 June 2020

Rachel M Chalmers

9

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1 June 2020

language of work or name

English

0 references

publication date

29 August 2015

1 reference

10 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

volume

16

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1 June 2020

page(s)

650

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Isolation and enrichment of Cryptosporidium DNA and verification of DNA purity for whole-genome sequencing

1 June 2020

cites work

1 reference

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Subtyping Cryptosporidium ubiquitum,a zoonotic pathogen emerging in humans

2 October 2017

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Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study

2 October 2017

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Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture

2 October 2017

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A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

2 October 2017

1 reference

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Fast gapped-read alignment with Bowtie 2

2 October 2017

1 reference

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Detection and differentiation of Cryptosporidium spp. in human clinical samples by use of real-time PCR

2 October 2017

1 reference

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Multi-locus analysis of human infective Cryptosporidium species and subtypes using ten novel genetic loci

2 October 2017

1 reference

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Re-description of Cryptosporidium cuniculus Inman and Takeuchi, 1979 (Apicomplexa: Cryptosporidiidae): morphology, biology and phylogeny

2 October 2017

1 reference

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Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

2 October 2017

1 reference

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Minireview: clinical cryptosporidiosis

2 October 2017

1 reference

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Database resources of the National Center for Biotechnology Information

2 October 2017

1 reference

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The genome of Cryptosporidium hominis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4552982

Complete Genome Sequence of the Apicomplexan, Cryptosporidium parvum

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4552982

Real-time PCR for quantification of Giardia and Cryptosporidium in environmental water samples and sewage

2 October 2017

1 reference

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Subgenotype analysis of Cryptosporidium isolates from humans, cattle, and zoo ruminants in Portugal

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4552982

Cloning and sequence analysis of a highly polymorphic Cryptosporidium parvum gene encoding a 60-kilodalton glycoprotein and characterization of its 15- and 45-kilodalton zoite surface antigen products

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4552982

Fidelity of phi 29 DNA polymerase. Comparison between protein-primed initiation and DNA polymerization.

2 October 2017

1 reference

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Basic local alignment search tool

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4552982

Effects of bovine colostrum supplementation on upper respiratory illness in active males.

2 October 2017

1 reference

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Comparative genome analysis of two Cryptosporidium parvum isolates with different host range.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4552982

RATT: Rapid Annotation Transfer Tool

27 July 2018

1 reference

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Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology

27 July 2018

1 reference

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ABACAS: algorithm-based automatic contiguation of assembled sequences

27 July 2018

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The epidemiology of sporadic human infections with unusual cryptosporidia detected during routine typing in England and Wales, 2000-2008.

27 July 2018

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The CpA135 gene as a marker to identify Cryptosporidium species infecting humans

25 September 2018

1 reference

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Infectivity of Cryptosporidium hominis and Cryptosporidium parvum genotype 2 isolates in immunosuppressed Mongolian gerbils

25 September 2018

1 reference

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Animal propagation and genomic survey of a genotype 1 isolate of Cryptosporidium parvum

25 September 2018

1 reference

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Ribosomal RNA gene organization in Cryptosporidium parvum

25 September 2018

1 reference

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Whole genome amplification (WGA) for archiving and genotyping of clinical isolates of Cryptosporidium species

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12864-015-1805-9

Fish oil increases the duodenal flow of long chain polyunsaturated fatty acids and trans-11 18:1 and decreases 18:0 in steers via changes in the rumen bacterial community

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26318339

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12864-015-1805-9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

26318339

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26318339%20AND%20SRC:MED&resulttype=core&format=json