Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of DNA hairpins (Q35812247)

10 August 2017

Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of DNA hairpins (English)

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10 August 2017

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Amit Meller

4

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Gerhard Hummer

object named as

Gerhard Hummer

5

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author name string

Olga K Dudko

1

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10 August 2017

Jérôme Mathé

2

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10 August 2017

Attila Szabo

3

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10 August 2017

language of work or name

English

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publication date

23 March 2007

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10 August 2017

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10 August 2017

92

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10 August 2017

12

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10 August 2017

4188-4195

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Direct measurement of the full, sequence-dependent folding landscape of a nucleic acid

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

A quantitative analysis of single protein-ligand complex separation with the atomic force microscope

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Simulation of polymer translocation through protein channels

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Forced-unfolding and force-quench refolding of RNA hairpins

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Orientation discrimination of single-stranded DNA inside the alpha-hemolysin membrane channel

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Nanopore unzipping of individual DNA hairpin molecules.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Nucleic acid transport through carbon nanotube membranes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Beyond the conventional description of dynamic force spectroscopy of adhesion bonds

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Kinetics from nonequilibrium single-molecule pulling experiments

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Mfold web server for nucleic acid folding and hybridization prediction

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Dynamics of DNA molecules in a membrane channel probed by active control techniques

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Translocation of rodlike polymers through membrane channels

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Rapid nanopore discrimination between single polynucleotide molecules

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Driven polymer translocation through a narrow pore

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Hysteresis in force probe measurements: a dynamical systems perspective

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Molecular dynamics study of unbinding of the avidin-biotin complex

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Dynamic strength of molecular adhesion bonds

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Characterization of individual polynucleotide molecules using a membrane channel

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

The reaction-limited kinetics of membrane-to-surface adhesion and detachment

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Detachment of agglutinin-bonded red blood cells. I. Forces to rupture molecular-point attachments

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Models for the Specific Adhesion of Cells to Cells

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Intrinsic rates and activation free energies from single-molecule pulling experiments.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Single stranded DNA translocation through a nanopore: a master equation approach.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Reversible unfolding of single RNA molecules by mechanical force

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Counterion Charge Density Determines the Position and Plasticity of RNA Folding Transition States

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Voltage-Driven DNA Translocations through a Nanopore

15 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1877759

Force-dependent fragility in RNA hairpins

15 November 2018

1 reference

12 December 2020

High base pair opening rates in tracts of GC base pairs

1 reference

12 December 2020

Driven DNA transport into an asymmetric nanometer-scale pore

1 reference

12 December 2020

Translocation of a beta-hairpin-forming peptide through a cylindrical tunnel

1 reference

12 December 2020

Force spectroscopy of single biomolecules

1 reference

12 December 2020

Theoretical analysis of dynamic force spectroscopy experiments on ligand-receptor complexes

1 reference

12 December 2020

10.1529/BIOPHYSJ.106.102855

Identifiers

DOI

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10 August 2017

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10 August 2017

PubMed publication ID

17384066

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