Domain swapping between FEN-1 and XPG defines regions in XPG that mediate nucleotide excision repair activity and substrate specificity. (Q35837402)

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29 December 2019

title

Domain swapping between FEN-1 and XPG defines regions in XPG that mediate nucleotide excision repair activity and substrate specificity (English)

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29 December 2019

6

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author name string

Marcel Hohl

1

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29 December 2019

Isabelle Dunand-Sauthier

2

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29 December 2019

Lidija Staresincic

3

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29 December 2019

Pascale Jaquier-Gubler

4

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29 December 2019

Fabrizio Thorel

5

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29 December 2019

Stuart G Clarkson

7

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29 December 2019

Orlando D Schärer

8

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29 December 2019

language of work or name

English

0 references

publication date

22 April 2007

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29 December 2019

published in

Nucleic Acids Research

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29 December 2019

volume

35

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29 December 2019

issue

9

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29 December 2019

page(s)

3053-3063

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Molecular mechanisms of mammalian global genome nucleotide excision repair.

29 December 2019

cites work

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Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: insights for transcription-coupled repair and Cockayne Syndrome

11 July 2018

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Suppression of UV-induced apoptosis by the human DNA repair protein XPG

11 July 2018

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Definition of a short region of XPG necessary for TFIIH interaction and stable recruitment to sites of UV damage

11 July 2018

1 reference

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11 July 2018

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The Fen1 extrahelical 3'-flap pocket is conserved from archaea to human and regulates DNA substrate specificity

11 July 2018

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Structural mechanisms of DNA replication, repair, and recombination

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11 July 2018

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Structural basis for FEN-1 substrate specificity and PCNA-mediated activation in DNA replication and repair

11 July 2018

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The comings and goings of nucleotide excision repair factors on damaged DNA

11 July 2018

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Flap endonuclease 1: a novel tumour suppresser protein

11 July 2018

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Structural determinants for substrate binding and catalysis by the structure-specific endonuclease XPG

11 July 2018

1 reference

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The flexible loop of human FEN1 endonuclease is required for flap cleavage during DNA replication and repair.

11 July 2018

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Cleavage specificity of Saccharomyces cerevisiae flap endonuclease 1 suggests a double-flap structure as the cellular substrate

11 July 2018

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In situ visualization of ultraviolet-light-induced DNA damage repair in locally irradiated human fibroblasts.

11 July 2018

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Sequential assembly of the nucleotide excision repair factors in vivo

11 July 2018

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Identification of rad27 mutations that confer differential defects in mutation avoidance, repeat tract instability, and flap cleavage

11 July 2018

1 reference

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Strong functional interactions of TFIIH with XPC and XPG in human DNA nucleotide excision repair, without a preassembled repairosome

11 July 2018

1 reference

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Human flap endonuclease-1: conformational change upon binding to the flap DNA substrate and location of the Mg2+ binding site

11 July 2018

1 reference

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Action of DNA repair endonuclease ERCC1/XPF in living cells

11 July 2018

1 reference

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Conserved residues of human XPG protein important for nuclease activity and function in nucleotide excision repair

11 July 2018

1 reference

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Structure of the DNA repair and replication endonuclease and exonuclease FEN-1: coupling DNA and PCNA binding to FEN-1 activity

11 July 2018

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Complementation of transformed fibroblasts from patients with combined xeroderma pigmentosum-Cockayne syndrome

11 July 2018

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The crystal structure of flap endonuclease-1 from Methanococcus jannaschii

11 July 2018

1 reference

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Characterization of reaction intermediates of human excision repair nuclease.

11 July 2018

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The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair

11 July 2018

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Open complex formation around a lesion during nucleotide excision repair provides a structure for cleavage by human XPG protein

11 July 2018

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DNA repair and ultraviolet mutagenesis in cells from a new patient with xeroderma pigmentosum group G and cockayne syndrome resemble xeroderma pigmentosum cells

11 July 2018

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Structure of bacteriophage T4 RNase H, a 5' to 3' RNA-DNA and DNA-DNA exonuclease with sequence similarity to the RAD2 family of eukaryotic proteins

11 July 2018

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A helical arch allowing single-stranded DNA to thread through T5 5'-exonuclease

11 July 2018

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Interactions involving the human RNA polymerase II transcription/nucleotide excision repair complex TFIIH, the nucleotide excision repair protein XPG, and Cockayne syndrome group B (CSB) protein

11 July 2018

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Analysis of incision sites produced by human cell extracts and purified proteins during nucleotide excision repair of a 1,3-intrastrand d(GpTpG)-cisplatin adduct

11 July 2018

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Calf 5' to 3' exo/endonuclease must slide from a 5' end of the substrate to perform structure-specific cleavage

11 July 2018

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Complementation of the DNA repair defect in xeroderma pigmentosum group G cells by a human cDNA related to yeast RAD2

11 July 2018

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The characterization of a mammalian DNA structure-specific endonuclease

11 July 2018

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XPG endonuclease makes the 3' incision in human DNA nucleotide excision repair

11 July 2018

1 reference

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Structural and functional homology between mammalian DNase IV and the 5'-nuclease domain of Escherichia coli DNA polymerase I

11 July 2018

1 reference

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DNA structural elements required for FEN-1 binding

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888826

RPA involvement in the damage-recognition and incision steps of nucleotide excision repair

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888826

XPG protein has a structure-specific endonuclease activity

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888826

Simultaneous establishment of monoclonal antibodies specific for either cyclobutane pyrimidine dimer or (6-4)photoproduct from the same mouse immunized with ultraviolet-irradiated DNA.

11 July 2018

1 reference

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The spacer region of XPG mediates recruitment to nucleotide excision repair complexes and determines substrate specificity

11 July 2018

1 reference

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TFIIH contains a PH domain involved in DNA nucleotide excision repair

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888826

The acetylatable lysines of human Fen1 are important for endo- and exonuclease activities

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888826

Local UV-induced DNA damage in cell nuclei results in local transcription inhibition

24 September 2018

1 reference

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Melanin offers protection against induction of cyclobutane pyrimidine dimers and 6-4 photoproducts by UVB in cultured human melanocytes

24 September 2018

1 reference

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The non-catalytic function of XPG protein during dual incision in human nucleotide excision repair.

24 September 2018

1 reference

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Heritable genetic alterations in a xeroderma pigmentosum group G/Cockayne syndrome pedigree

24 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17452369

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Assay for nucleotide excision repair protein activity using fractionated cell extracts and UV-damaged plasmid DNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17452369

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM092

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452369%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452369%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

1 reference