A soybean transcript map: gene distribution, haplotype and single-nucleotide polymorphism analysis (Q35844957)

10 August 2017

A soybean transcript map: gene distribution, haplotype and single-nucleotide polymorphism analysis (English)

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single-nucleotide polymorphism

10 August 2017

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2

David L Hyten

1 reference

10 August 2017

Ik-Young Choi

1

1 reference

10 August 2017

Lakshmi K Matukumalli

3

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10 August 2017

Qijian Song

4

1 reference

10 August 2017

Julian M Chaky

5

1 reference

10 August 2017

Charles V Quigley

6

1 reference

10 August 2017

Kevin Chase

7

1 reference

10 August 2017

K Gordon Lark

8

1 reference

10 August 2017

Robert S Reiter

9

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10 August 2017

Mun-Sup Yoon

10

1 reference

10 August 2017

Eun-Young Hwang

11

1 reference

10 August 2017

Seung-In Yi

12

1 reference

10 August 2017

Nevin D Young

13

1 reference

10 August 2017

Randy C Shoemaker

14

1 reference

10 August 2017

Curtis P van Tassell

15

1 reference

10 August 2017

James E Specht

16

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10 August 2017

Perry B Cregan

17

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10 August 2017

language of work or name

English

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publication date

4 March 2007

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10 August 2017

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10 August 2017

176

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10 August 2017

1

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10 August 2017

685-696

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Impacts of genetic bottlenecks on soybean genome diversity

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

SNP-PHAGE--High throughput SNP discovery pipeline

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Miniaturized platforms for the detection of single-nucleotide polymorphisms.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Application of machine learning in SNP discovery

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Toward genome-wide SNP genotyping

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

The pattern of polymorphism in Arabidopsis thaliana

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

A multilocus sequence survey in Arabidopsis thaliana reveals a genome-wide departure from a neutral model of DNA sequence polymorphism

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

ESTminer: a suite of programs for gene and allele identification

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignments

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Soybean bacterial artificial chromosome contigs anchored with RFLPs: insights into genome duplication and gene clustering

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

A new integrated genetic linkage map of the soybean

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Single-nucleotide polymorphisms in soybean

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

A Drosophila full-length cDNA resource

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Arabidopsis map-based cloning in the post-genome era

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Accessing genetic variation: genotyping single nucleotide polymorphisms

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Soybean genomic survey: BAC-end sequences near RFLP and SSR markers.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp. mays L.).

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

A microsphere-based assay for multiplexed single nucleotide polymorphism analysis using single base chain extension

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Patterns of single-nucleotide polymorphisms in candidate genes for blood-pressure homeostasis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Consed: a graphical tool for sequence finishing

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Base-calling of automated sequencer traces using phred. II. Error probabilities

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Genome duplication in soybean (Glycine subgenus soja).

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Haplotype structure at seven barley genes: relevance to gene pool bottlenecks, phylogeny of ear type and site of barley domestication.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

The effects of artificial selection on the maize genome

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Comparison of four flow cytometric SNP detection assays and their use in plant improvement

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Mining EST databases to resolve evolutionary events in major crop species

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Comparative population genetics of the panicoid grasses: sequence polymorphism, linkage disequilibrium and selection in a diverse sample of sorghum bicolor.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Insertion-deletion polymorphisms in 3' regions of maize genes occur frequently and can be used as highly informative genetic markers.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

A general approach to single-nucleotide polymorphism discovery.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1893076

Search for and analysis of single nucleotide polymorphisms (SNPs) in rice (Oryza sativa, Oryza rufipogon) and establishment of SNP markers

24 September 2018

1 reference

12 December 2020

Use of cleaved amplified polymorphic sequences (CAPS) as genetic markers in Arabidopsis thaliana

1 reference

12 December 2020

Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress

1 reference

12 December 2020

Discovery and assay of single-nucleotide polymorphisms in barley (Hordeum vulgare)

1 reference

12 December 2020

10.1534/GENETICS.107.070821

Identifiers

DOI

1 reference

10 August 2017

1 reference

10 August 2017

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