Recombinant transfer in the basic genome of Escherichia coli. (Q35895593)

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18 February 2020

title

Recombinant transfer in the basic genome of Escherichia coli (English)

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18 February 2020

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4

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18 February 2020

author name string

Purushottam D Dixit

series ordinal

1

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18 February 2020

Tin Yau Pang

series ordinal

2

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18 February 2020

F William Studier

series ordinal

3

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18 February 2020

language of work or name

English

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publication date

7 July 2015

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Proceedings of the National Academy of Sciences of the United States of America

18 February 2020

number of pages

6

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based on heuristic

inferred from page(s)

published in

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18 February 2020

volume

112

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18 February 2020

issue

29

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18 February 2020

page(s)

9070-9075

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Pervasive domestication of defective prophages by bacteria

18 February 2020

cites work

1 reference

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Inference of the properties of the recombination process from whole bacterial genomes

11 July 2018

1 reference

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Highlights of the DNA cutters: a short history of the restriction enzymes

11 July 2018

1 reference

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Type I restriction enzymes and their relatives.

11 July 2018

1 reference

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The evolutionary path to extraintestinal pathogenic, drug-resistant Escherichia coli is marked by drastic reduction in detectable recombination within the core genome

11 July 2018

1 reference

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Horizontal gene transfer and the evolution of bacterial and archaeal population structure

11 July 2018

1 reference

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Impact of homologous and non-homologous recombination in the genomic evolution of Escherichia coli

11 July 2018

1 reference

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Isolation of generalized transducing bacteriophages for uropathogenic strains of Escherichia coli

11 July 2018

1 reference

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Origins of bacterial diversity through horizontal genetic transfer and adaptation to new ecological niches

11 July 2018

1 reference

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Bacteriophages and genetic mobilization in sewage and faecally polluted environments.

11 July 2018

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progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

11 July 2018

1 reference

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The population genetics of commensal Escherichia coli

11 July 2018

1 reference

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Explaining microbial population genomics through phage predation.

11 July 2018

1 reference

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The Bacterial Species Challenge: Making Sense of Genetic and Ecological Diversity

11 July 2018

1 reference

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Estimating the size of the bacterial pan-genome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

11 July 2018

1 reference

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Historical contingency and the evolution of a key innovation in an experimental population of Escherichia coli

11 July 2018

1 reference

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Recombination and the nature of bacterial speciation

11 July 2018

1 reference

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Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Horizontal gene transfer, genome innovation and evolution

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Cassette-like variation of restriction enzyme genes in Escherichia coli C and relatives

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Molecular evolution of the Escherichia coli chromosome. VI. Two regions of high effective recombination.

11 July 2018

1 reference

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Prokaryotic evolution in light of gene transfer

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Origins of the coalescent. 1974-1982

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Lateral gene transfer and the nature of bacterial innovation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Barriers to genetic exchange between bacterial species: Streptococcus pneumoniae transformation

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Molecular evolution of the Escherichia coli chromosome. V. Recombination patterns among strains of diverse origin.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Mutation, recombination, and incipient speciation of bacteria in the laboratory

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

11 July 2018

1 reference

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Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria

11 July 2018

1 reference

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Recombination and Population Structure in Escherichia coli

11 July 2018

1 reference

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Inferring coalescence times from DNA sequence data

11 July 2018

1 reference

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Transduction, restriction and recombination patterns in Escherichia coli

11 July 2018

1 reference

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The log-linear relationship between sexual isolation and sequence divergence in Bacillus transformation is robust

11 July 2018

1 reference

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Recombination in Escherichia coli and the definition of biological species

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Understanding the differences between genome sequences of Escherichia coli B strains REL606 and BL21(DE3) and comparison of the E. coli B and K-12 genomes

11 July 2018

1 reference

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A generalized transducing phage for the murine pathogen Citrobacter rodentium

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4517234

Clonal divergence in Escherichia coli as a result of recombination, not mutation

24 September 2018

1 reference

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Mutation Rate Inferred From Synonymous Substitutions in a Long-Term Evolution Experiment With Escherichia coli

24 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1510839112

Bacteriophage-mediated generalized transduction in Escherichia coli and Salmonella typhimurium

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1510839112

21 January 2018

Identifiers

DOI

10.1073/PNAS.1510839112

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26153419%20AND%20SRC:MED&resulttype=core&format=json

18 February 2020

0 references

1 reference

1 reference

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18 February 2020

PubMed publication ID

26153419

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26153419%20AND%20SRC:MED&resulttype=core&format=json