Random mutations to evaluate the role of bases at two important single-stranded regions of genomic HDV ribozyme (Q35923811)

11 August 2017

Random mutations to evaluate the role of bases at two important single-stranded regions of genomic HDV ribozyme (English)

1 reference

11 August 2017

0 references

P. K. Kumar

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1508677

3 October 2022

Y. A. Suh

2

1 reference

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3 October 2022

H. Miyashiro

3

1 reference

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3 October 2022

F. Nishikawa

4

1 reference

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3 October 2022

J. Kawakami

5

1 reference

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3 October 2022

K. Taira

6

1 reference

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3 October 2022

S. Nishikawa

7

1 reference

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3 October 2022

language of work or name

English

0 references

publication date

1 August 1992

1 reference

PMC publication ID

334067

11 August 2017

11 August 1992

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=1508677

full work available at URL

3 October 2022

https://europepmc.org/articles/PMC334067

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1508677

https://europepmc.org/articles/PMC334067?pdf=render

3 October 2022

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1508677

3 October 2022

published in

Nucleic Acids Research

1 reference

11 August 2017

20

1 reference

11 August 2017

15

1 reference

11 August 2017

3919-3924

1 reference

Self-cleavage of plus and minus RNA transcripts of avocado sunblotch viroid

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Molecular cloning and sequencing of a human hepatitis delta (delta) virus RNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Production of single-stranded plasmid DNA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Characterization of self-cleaving RNA sequences on the genome and antigenome of human hepatitis delta virus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Self-cleavage of RNA in the replication of small pathogens of plants and animals

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Human hepatitis delta virus RNA subfragments contain an autocleavage activity

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Antigenomic RNA of human hepatitis delta virus can undergo self-cleavage.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

RNA conformational requirements of self-cleavage of hepatitis delta virus RNA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

'Hairpin' catalytic RNA model: evidence for helices and sequence requirement for substrate RNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

A pseudoknot-like structure required for efficient self-cleavage of hepatitis delta virus RNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Efficient trans cleavage and a common structural motif for the ribozymes of the human hepatitis delta agent

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Evidence that genomic and antigenomic RNA self-cleaving elements from hepatitis delta virus have similar secondary structures

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Preferential chelation of cationic ligands to axial-equatorial oxygens over equatorial-equatorial dianionic oxygens: implication to the mechanism of action of ribozymes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Self-cleavage of a 71 nucleotide-long ribozyme derived from hepatitis delta virus genomic RNA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Cleavage of oligoribonucleotides by a ribozyme derived from the hepatitis .delta. virus RNA sequence

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Rate limiting P-O(5') bond cleavage of RNA fragment: ab initio molecular orbital calculations on the base-catalyzed hydrolysis of phosphate

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Antigenomic Hepatitis delta virus ribozymes self-cleave in 18 M formamide

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Mixed DNA/RNA polymers are cleaved by the hammerhead ribozyme

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Specific association between an endoribonucleolytic sequence from a satellite RNA and a substrate analogue containing a 2'-5' phosphodiester

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Deletion of internal sequence on the HDV-ribozyme: elucidation of functionally important single-stranded loop regions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

The self-cleaving domain from the genomic RNA of hepatitis delta virus: sequence requirements and the effects of denaturant

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Sequence and structure of the catalytic RNA of hepatitis delta virus genomic RNA

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Sequence requirements of the hammerhead RNA self-cleavage reaction

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Fulminant B viral hepatitis: role of delta agent.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Self-cleavage of hepatitis delta virus genomic strand RNA is enhanced under partially denaturing conditions

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=334067

Energetics of RNA cleavage: implications for the mechanism of action of ribozymes

24 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/1508677

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/20.15.3919

1 reference

11 August 2017

1 reference

PMC publication ID

334067

11 August 2017

1 reference

PMC publication ID

334067