A shared MHC supertype motif emerges by convergent evolution in macaques and mice, but is totally absent in human MHC molecules (Q35951928)

11 August 2017

A shared MHC supertype motif emerges by convergent evolution in macaques and mice, but is totally absent in human MHC molecules (English)

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11 August 2017

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Alessandro Sette

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David I Watkins

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John Sidney

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Scott Southwood

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Bianca R Mothé

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Ilka Hoof

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Curtis P McMurtrey

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11 August 2017

Carrie Moore

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Jessica Berry

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11 August 2017

Courtney Dow

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11 August 2017

Kate Bradley

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Mark G Lewis

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William H Hildebrand

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Nancy A Wilson

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language of work or name

English

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publication date

10 February 2012

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421-434

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https://scigraph.springernature.com/pub.10.1007/s00251-011-0598-5

11 August 2017

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cites work

The role of MHC class I allele Mamu-A*07 during SIV(mac)239 infection

1 reference

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Functional analysis of frequently expressed Chinese rhesus macaque MHC class I molecules Mamu-A1*02601 and Mamu-B*08301 reveals HLA-A2 and HLA-A3 supertypic specificities

2 October 2017

1 reference

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The most common Chinese rhesus macaque MHC class I molecule shares peptide binding repertoire with the HLA-B7 supertype

2 October 2017

1 reference

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IPD--the Immuno Polymorphism Database

2 October 2017

1 reference

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Major histocompatibility complex genotyping with massively parallel pyrosequencing

2 October 2017

1 reference

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Two MHC class I molecules associated with elite control of immunodeficiency virus replication, Mamu-B*08 and HLA-B*2705, bind peptides with sequence similarity

2 October 2017

1 reference

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jModelTest: phylogenetic model averaging

2 October 2017

1 reference

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Structural and functional constraints limit options for cytotoxic T-lymphocyte escape in the immunodominant HLA-B27-restricted epitope in human immunodeficiency virus type 1 capsid

2 October 2017

1 reference

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Identification of breast cancer peptide epitopes presented by HLA-A*0201.

2 October 2017

1 reference

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Macaque models of human infectious disease

2 October 2017

1 reference

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Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Identification of MHC class I sequences in Chinese-origin rhesus macaques

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Patterns of CD8+ immunodominance may influence the ability of Mamu-B*08-positive macaques to naturally control simian immunodeficiency virus SIVmac239 replication

2 October 2017

1 reference

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Dendroscope: An interactive viewer for large phylogenetic trees

2 October 2017

1 reference

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The major histocompatibility complex class II alleles Mamu-DRB1*1003 and -DRB1*0306 are enriched in a cohort of simian immunodeficiency virus-infected rhesus macaque elite controllers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Mamu-B*08-positive macaques control simian immunodeficiency virus replication

2 October 2017

1 reference

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Application of phylogenetic networks in evolutionary studies

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Classification of A1- and A24-supertype molecules by analysis of their MHC-peptide binding repertoires

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Characterization of the peptide-binding specificity of Mamu-A*11 results in the identification of SIV-derived epitopes and interspecies cross-reactivity

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

MHC class I molecules and KIRs in human history, health and survival

2 October 2017

1 reference

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Identification of seventeen new simian immunodeficiency virus-derived CD8+ T cell epitopes restricted by the high frequency molecule, Mamu-A*02, and potential escape from CTL recognition

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Evidence for an ancient selective sweep in the MHC class I gene repertoire of chimpanzees

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Characterization of the peptide-binding specificity of Mamu-B*17 and identification of Mamu-B*17-restricted epitopes derived from simian immunodeficiency virus proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Majority of peptides binding HLA-A*0201 with high affinity crossreact with other A2-supertype molecules

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Molecular determinants of peptide binding to two common rhesus macaque major histocompatibility complex class II molecules.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

CD8(+) lymphocytes from simian immunodeficiency virus-infected rhesus macaques recognize 14 different epitopes bound by the major histocompatibility complex class I molecule mamu-A*01: implications for vaccine design and testing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Conserved MHC class I peptide binding motif between humans and rhesus macaques.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Exploring immunological specificity using synthetic peptide combinatorial libraries.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Three-dimensional structure of H-2Dd complexed with an immunodominant peptide from human immunodeficiency virus envelope glycoprotein 120

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

The crystal structure of H-2Dd MHC class I complexed with the HIV-1-derived peptide P18-I10 at 2.4 A resolution: implications for T cell and NK cell recognition

2 October 2017

1 reference

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H-2Dd exploits a four residue peptide binding motif

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Peptide binding to the most frequent HLA-A class I alleles measured by quantitative molecular binding assays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

The three-dimensional structure of peptide-MHC complexes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Genital mucosal transmission of simian immunodeficiency virus: animal model for heterosexual transmission of human immunodeficiency virus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Induction of AIDS in rhesus monkeys by molecularly cloned simian immunodeficiency virus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Refined structure of the human histocompatibility antigen HLA-A2 at 2.6 A resolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Pinpointing a selective sweep to the chimpanzee MHC class I region by comparative genomics

11 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00251-011-0598-5

Two complementary methods for predicting peptides binding major histocompatibility complex molecules.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00251-011-0598-5

C-terminal epitope tagging facilitates comparative ligand mapping from MHC class I positive cells.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00251-011-0598-5

Class I molecules with similar peptide-binding specificities are the result of both common ancestry and convergent evolution.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

Characterization of the peptide binding motif of a rhesus MHC class I molecule (Mamu-A*01) that binds an immunodominant CTL epitope from simian immunodeficiency virus.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3349854

The high frequency Indian rhesus macaque MHC class I molecule, Mamu-B*01, does not appear to be involved in CD8+ T lymphocyte responses to SIVmac239

24 September 2018

1 reference

12 December 2020

HLA supertypes and supermotifs: a functional perspective on HLA polymorphism

1 reference

12 December 2020

Rhesus macaque MHC class I molecules present HLA-B-like peptides

1 reference

12 December 2020

Definition of specific peptide motifs for four major HLA-A alleles

1 reference

12 December 2020

Retrospective analysis of viral load and SIV antibody responses in rhesus macaques infected with pathogenic SIV: predictive value for disease progression

1 reference

12 December 2020

10.1007/S00251-011-0598-5

Identifiers

DOI

1 reference

11 August 2017

1 reference

11 August 2017

1 reference