Conformational dynamics in loop swap mutants of homologous fibronectin type III domains (Q35972988)

11 August 2017

Conformational dynamics in loop swap mutants of homologous fibronectin type III domains (English)

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11 August 2017

2

Cinque Soto

1 reference

11 August 2017

Keri Siggers

1

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11 August 2017

Arthur G Palmer

series ordinal

3

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11 August 2017

language of work or name

English

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publication date

25 May 2007

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11 August 2017

10

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inferred from page(s)

published in

Biophysical Journal

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11 August 2017

93

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11 August 2017

7

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11 August 2017

2447-2456

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Protein structure prediction: inroads to biology.

11 August 2017

1 reference

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Engineered proteins as specific binding reagents.

2 October 2017

1 reference

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Nanosecond dynamics of acetylcholinesterase near the active center gorge

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Amino acid substitutions in a long flexible sequence influence thermodynamics and internal dynamic properties of winged helix protein genesis and its DNA complex

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

FAST-Modelfree: a program for rapid automated analysis of solution NMR spin-relaxation data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Antibody multispecificity mediated by conformational diversity

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

The Xplor-NIH NMR molecular structure determination package

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Evaluating conformational free energies: the colony energy and its application to the problem of loop prediction

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

An improved method for distinguishing between anisotropic tumbling and chemical exchange in analysis of 15N relaxation parameters

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

The folding nucleus of a fibronectin type III domain is composed of core residues of the immunoglobulin-like fold

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

The fibronectin type III domain as a scaffold for novel binding proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

1H, 13C and 15N chemical shift referencing in biomolecular NMR

2 October 2017

1 reference

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NMRPipe: a multidimensional spectral processing system based on UNIX pipes

2 October 2017

1 reference

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Backbone dynamics of Escherichia coli ribonuclease HI: correlations with structure and function in an active enzyme

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

The three-dimensional structure of the tenth type III module of fibronectin: an insight into RGD-mediated interactions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Structure of a Fibronectin Type III Domain from Tenascin Phased by MAD Analysis of the Selenomethionyl Protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Folding of beta-sandwich proteins: three-state transition of a fibronectin type III module

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Evaluation of the conformational free energies of loops in proteins.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Hydrophobic core fluidity of homologous protein domains: relation of side-chain dynamics to core composition and packing.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Exploring the potential of the monobody scaffold: effects of loop elongation on the stability of a fibronectin type III domain

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Correlation of binding-loop internal dynamics with stability and function in potato I inhibitor family: relative contributions of Arg(50) and Arg(52) in Cucurbita maxima trypsin inhibitor-V as studied by site-directed mutagenesis and NMR spectroscop

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

CPMG sequences with enhanced sensitivity to chemical exchange

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

The effect of boundary selection on the stability and folding of the third fibronectin type III domain from human tenascin

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Interactions between type III domains in the 110 kDa cell-binding fragment of fibronectin.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1965443

Cell- and heparin-binding domains of the hexabrachion arm identified by tenascin expression proteins

24 September 2018

1 reference

12 December 2020

Rotational diffusion anisotropy of proteins from simultaneous analysis of 15N and 13C alpha nuclear spin relaxation

1 reference

12 December 2020

Folding and stability of a fibronectin type III domain of human tenascin

1 reference

12 December 2020

Backbone dynamics of homologous fibronectin type III cell adhesion domains from fibronectin and tenascin

1 reference

12 December 2020

Pervasive conformational fluctuations on microsecond time scales in a fibronectin type III domain

1 reference

12 December 2020

Sequence and context dependence of EF-hand loop dynamics. An 15N relaxation study of a calcium-binding site mutant of calbindin D9k

1 reference

12 December 2020

The dependence of chemical exchange on boundary selection in a fibronectin type III domain from human tenascin

1 reference

12 December 2020

Separating the contributions to 15N transverse relaxation in a fibronectin type III domain

1 reference

12 December 2020

The folding of an immunoglobulin-like Greek key protein is defined by a common-core nucleus and regions constrained by topology

1 reference

12 December 2020

Two proteins with the same structure respond very differently to mutation: the role of plasticity in protein stability

1 reference

12 December 2020

Comparison of backbone dynamics of monomeric and domain-swapped stefin A

1 reference

12 December 2020

NMR characterization of the dynamics of biomacromolecules

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12 December 2020

10.1529/BIOPHYSJ.106.100578

Identifiers

DOI

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11 August 2017

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11 August 2017

PubMed publication ID

17526562

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