Methods for genome-wide analysis of gene expression changes in polyploids (Q36002753)

11 August 2017

Methods for genome-wide analysis of gene expression changes in polyploids (English)

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11 August 2017

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9

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11 August 2017

Jianlin Wang

1

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11 August 2017

Jinsuk J Lee

2

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11 August 2017

Lu Tian

3

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11 August 2017

Hyeon-Se Lee

4

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11 August 2017

Meng Chen

5

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11 August 2017

Sheetal Rao

6

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11 August 2017

Edward N Wei

7

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11 August 2017

R W Doerge

8

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11 August 2017

Z Jeffrey Chen

10

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11 August 2017

language of work or name

English

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publication date

1 January 2005

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11 August 2017

Methods in Enzymology

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11 August 2017

395

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11 August 2017

570-596

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The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Sensitivity of 70-mer oligonucleotides and cDNAs for microarray analysis of gene expression in Arabidopsis and its related species

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Stochastic and epigenetic changes of gene expression in Arabidopsis polyploids

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Understanding mechanisms of novel gene expression in polyploids

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Microarray data normalization and transformation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Fundamentals of experimental design for cDNA microarrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Computational analysis of microarray data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Protein-coding genes are epigenetically regulated in Arabidopsis polyploids

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

A novel, sensitive detection system for high-density microarrays using dendrimer technology

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

A high-throughput AFLP-based method for constructing integrated genetic and physical maps: progress toward a sorghum genome map.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Genome-wide analysis of DNA copy-number changes using cDNA microarrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

High density synthetic oligonucleotide arrays

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Stability, specificity and fluorescence brightness of multiply-labeled fluorescent DNA probes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Serial analysis of gene expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Quantitative monitoring of gene expression patterns with a complementary DNA microarray

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

AFLP: a new technique for DNA fingerprinting

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

More powerful procedures for multiple significance testing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Light-directed, spatially addressable parallel chemical synthesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Arbitrarily primed PCR fingerprinting of RNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Gene chips: array of hope for understanding gene regulation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Dendritic nucleic acid structures.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Phenotypic instability and rapid gene silencing in newly formed arabidopsis allotetraploids.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Microarrays: biotechnology's discovery platform for functional genomics.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Visualization of differential gene expression using a novel method of RNA fingerprinting based on AFLP: analysis of gene expression during potato tuber development

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986650

Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments

23 September 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2995030-1

7 January 2021

Robust Locally Weighted Regression and Smoothing Scatterplots

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2995030-1

7 January 2021

Ploidy regulation of gene expression

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2995030-1

7 January 2021

Experimental design for gene expression microarrays

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2995030-1

7 January 2021

Genetic mapping and QTL analysis of fiber-related traits in cotton (Gossypium)

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2995030-1

7 January 2021

Genomic change and gene silencing in polyploids

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2995030-1

7 January 2021

10.1016/S0076-6879(05)95030-1

Identifiers

DOI

1 reference

release_qxts2re26bguzf6t757ndj6cna

11 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/qxts2re26bguzf6t757ndj6cna

24 November 2022

mapped directly with Wikidata item

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11 August 2017

PubMed publication ID

15865985

1 reference