The origin of conserved protein domains and amino acid repeats via adaptive competition for control over amino acid residues (Q36011097)

11 August 2017

The origin of conserved protein domains and amino acid repeats via adaptive competition for control over amino acid residues (English)

1 reference

11 August 2017

1

Mary M Rorick

1 reference

11 August 2017

Günter P Wagner

2

1 reference

PMC publication ID

3368225

11 August 2017

language of work or name

1 reference

19 December 2009

1 reference

Journal of Molecular Evolution

11 August 2017

1 reference

11 August 2017

70

1 reference

11 August 2017

1

1 reference

11 August 2017

29-43

1 reference

Adaptive changes in the transcription factor HoxA-11 are essential for the evolution of pregnancy in mammals

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Tinkering with transcription factor proteins: the role of transcription factor adaptation in developmental evolution.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

CDD: a conserved domain database for interactive domain family analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Adaptive evolution of Hox-gene homeodomains after cluster duplications

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Functional insights from the distribution and role of homopeptide repeat-containing proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Simple sequence repeats in proteins and their significance for network evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Molecular origins of rapid and continuous morphological evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Comparative analysis of amino acid repeats in rodents and humans

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Microsatellites within genes: structure, function, and evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Analysing six types of protein-protein interfaces

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Detecting cryptically simple protein sequences using the SIMPLE algorithm.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Amino acid runs in eukaryotic proteomes and disease associations

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Trinucleotide repeats: mechanisms and pathophysiology

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Exploring protein sequence space using knowledge-based potentials.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Functional domains of the Drosophila Engrailed protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Codon reiteration and the evolution of proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Statistical significance of sequence patterns in proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Rates of change in quantitative traits from fixation of new mutations

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Slipped-strand mispairing: a major mechanism for DNA sequence evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Trinucleotide repeats in yeast

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Conservation of polyglutamine tract size between mice and humans depends on codon interruption

11 July 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-009-9305-7

The comparative genomics of polyglutamine repeats: extreme differences in the codon organization of repeat-encoding regions between mammals and Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-009-9305-7

A role for selection in regulating the evolutionary emergence of disease-causing and other coding CAG repeats in humans and mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-009-9305-7

Nucleotide compositional constraints on genomes generate alanine-, glycine-, and proline-rich structures in transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00239-009-9305-7

Hypermutability of HoxA13A and functional divergence from its paralog are associated with the origin of a novel developmental feature in zebrafish and related taxa (Cypriniformes).

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

A simple statistical method for estimating type-II (cluster-specific) functional divergence of protein sequences.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Repressor domain and nuclear localization signal of the murine Hoxa-11 protein are located in the homeodomain: no evidence for role of poly alanine stretches in transcriptional repression.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Amino acid reiterations in yeast are overrepresented in particular classes of proteins and show evidence of a slippage-like mutational process.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Stabilization of microsatellite sequences by variant repeats in the yeast Saccharomyces cerevisiae

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368225

Are non‐functional, unfolded proteins (‘junk proteins’) common in the genome?

23 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20024539

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Highly constrained proteins contain an unexpectedly large number of amino acid tandem repeats

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20024539

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S00239-009-9305-7

1 reference

11 August 2017

1 reference

PMC publication ID

3368225

11 August 2017

PubMed publication ID

20024539

1 reference

PMC publication ID

3368225