Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1(T)). (Q36011710)

11 August 2017

Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1(T)). (English)

1 reference

Polynucleobacter necessarius

11 August 2017

0 references

whole genome sequencing

1 reference

based on heuristic

inferred from title

Polynucleobacter necessarius

1 reference

1 reference

20

1 reference

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22

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23

1 reference

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24

1 reference

11 August 2017

3

Alla Lapidus

0 references

Hans-Peter Klenk

29

Hans-Peter Klenk

0 references

Tijana Glavina Del Rio

6

Tijana Glavina Del Rio

0 references

Roxanne Tapia

15

Roxanne Tapia

0 references

Tanja Woyke

25

Tanja Woyke

0 references

Martin W Hahn

Martin W Hahn

28

0 references

Sam Pitluck

10

Sam Pitluck

1 reference

11 August 2017

13

Lynne Goodwin

1 reference

11 August 2017

21

Loren Hauser

1 reference

11 August 2017

4

Susan Lucas

1 reference

11 August 2017

9

Hope Tice

1 reference

11 August 2017

16

John C Detter

1 reference

11 August 2017

2

Alex Copeland

1 reference

11 August 2017

12

David Bruce

1 reference

11 August 2017

7

Nancy Hammon

1 reference

11 August 2017

1

Linda Meincke

1 reference

11 August 2017

14

Cliff Han

1 reference

11 August 2017

8

Eileen Dalin

1 reference

11 August 2017

5

Kerrie W Berry

1 reference

11 August 2017

17

Jeremy Schmutz

1 reference

11 August 2017

19

Frank Larimer

1 reference

11 August 2017

Paul Richardson

11

1 reference

11 August 2017

Thomas Brettin

18

1 reference

11 August 2017

Qinglong L Wu

26

1 reference

11 August 2017

Matthias Pöckl

27

1 reference

11 August 2017

5 March 2012

1 reference

Standards in genomic sciences

11 August 2017

1 reference

11 August 2017

6

1 reference

11 August 2017

1

1 reference

11 August 2017

74-83

1 reference

https://scigraph.springernature.com/pub.10.4056/sigs.2395367

11 August 2017

0 references

cites work

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Polynucleobacter difficilis sp. nov., a planktonic freshwater bacterium affiliated with subcluster B1 of the genus Polynucleobacter

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

A guide to the natural history of freshwater lake bacteria

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Polynucleobacter rarus sp. nov., a free-living planktonic bacterium isolated from an acidic lake

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Polynucleobacter acidiphobus sp. nov., a representative of an abundant group of planktonic freshwater bacteria

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Ubiquity of Polynucleobacter necessarius ssp. asymbioticus in lentic freshwater habitats of a heterogeneous 2000 km area

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

2 October 2017

1 reference

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Polynucleobacter cosmopolitanus sp. nov., free-living planktonic bacteria inhabiting freshwater lakes and rivers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

A rapid bootstrap algorithm for the RAxML Web servers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

The minimum information about a genome sequence (MIGS) specification

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Identifying bacterial genes and endosymbiont DNA with Glimmer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Low intraspecific diversity in a polynucleobacter subcluster population numerically dominating bacterioplankton of a freshwater pond

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Improved prediction of signal peptides: SignalP 3.0

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Isolation of strains belonging to the cosmopolitan Polynucleobacter necessarius cluster from freshwater habitats located in three climatic zones

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Multiple sequence alignment using partial order graphs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Gene ontology: tool for the unification of biology

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

CRITICA: coding region identification tool invoking comparative analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Taxonomic note: implementation of the provisional status Candidatus for incompletely described procaryotes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Basic local alignment search tool

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Emended description of the genus Polynucleobacter and the species Polynucleobacter necessarius and proposal of two subspecies, P. necessarius subsp. necessarius subsp. nov. and P. necessarius subsp. asymbioticus subsp. nov

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368402

Polynucleobacter necessarius gen. nov., sp. nov., an Obligately Endosymbiotic Bacterium Living in the Cytoplasm of Euplotes aediculatus

11 July 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2395367

List of new names and new combinations previously effectively, but not validly, published

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2395367

A molecular approach to the tangled intrageneric relationships underlying phylogeny in Euplotes (Ciliophora, Spirotrichea).

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2395367

Endosymbiosis in statu nascendi: close phylogenetic relationship between obligately endosymbiotic and obligately free-living Polynucleobacter strains (Betaproteobacteria).

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2395367

Report of the Ad Hoc Committee on Reconciliation of Approaches to Bacterial Systematics

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2395367

[Bacterial symbionts of the ciliates of the genus Euplotes]

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22675600

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4056/SIGS.2395367

1 reference

Dimensions Publication ID

11 August 2017

1036981978

0 references

Fatcat ID

release_bacx6oog7fgelo3han3emaoh5a

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/bacx6oog7fgelo3han3emaoh5a

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

11 August 2017

1 reference