Patterns of bacterial biodiversity in the glacial meltwater streams of the McMurdo Dry Valleys, Antarctica (Q36096309)

15 June 2018

title

Patterns of bacterial biodiversity in the glacial meltwater streams of the McMurdo Dry Valleys, Antarctica (English)

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15 June 2018

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Tyler J Kohler

5

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Diane M. McKnight

6

object named as

Diane M McKnight

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15 June 2018

author name string

David J Van Horn

1

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15 June 2018

Caitlin R Wolf

2

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15 June 2018

Daniel R Colman

3

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15 June 2018

Xiaoben Jiang

4

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15 June 2018

Lee F Stanish

7

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15 June 2018

Terrill Yazzie

8

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15 June 2018

Cristina D Takacs-Vesbach

9

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15 June 2018

publication date

5 August 2016

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15 June 2018

FEMS Microbiology Ecology

published in

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15 June 2018

volume

92

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15 June 2018

issue

10

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15 June 2018

Stream microbial diversity in response to environmental changes: review and synthesis of existing research

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Biodiversity, community structure and function of biofilms in stream ecosystems

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Diversity of cyanobacterial species and phylotypes in biofilms from the littoral zone of Lake Baikal.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

The epsomitic phototrophic microbial mat of Hot Lake, Washington: community structural responses to seasonal cycling

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Accelerated thermokarst formation in the McMurdo Dry Valleys, Antarctica

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Factors Controlling Soil Microbial Biomass and Bacterial Diversity and Community Composition in a Cold Desert Ecosystem: Role of Geographic Scale

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Microbial biodiversity in glacier-fed streams.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Cyanobacterial diversity across landscape units in a polar desert: Taylor Valley, Antarctica

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Bacteria and diatom co-occurrence patterns in microbial mats from polar desert streams

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Microbial biogeography of arctic streams: exploring influences of lithology and habitat

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Beyond biogeographic patterns: processes shaping the microbial landscape.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Benthic cyanobacterial mats in the high arctic: multi-layer structure and fluorescence responses to osmotic stress

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Metagenomic analysis of stress genes in microbial mat communities from Antarctica and the High Arctic.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Comparative microbial diversity analyses of modern marine thrombolitic mats by barcoded pyrosequencing

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Analysis of bacterial and archaeal diversity in coastal microbial mats using massive parallel 16S rRNA gene tag sequencing

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Removing noise from pyrosequenced amplicons

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Assessment of bacterial diversity in the cattle tick Rhipicephalus (Boophilus) microplus through tag-encoded pyrosequencing

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Bacterial community structure along moisture gradients in the parafluvial sediments of two ephemeral desert streams

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Supervised classification of microbiota mitigates mislabeling errors

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Search and clustering orders of magnitude faster than BLAST

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

QIIME allows analysis of high-throughput community sequencing data

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

PyNAST: a flexible tool for aligning sequences to a template alignment

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Global distribution of cyanobacterial ecotypes in the cold biosphere

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Bacterial community composition of stream biofilms in spatially variable-flow environments

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

The importance of niches for the maintenance of species diversity

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Global patterns in belowground communities.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

A method for studying protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Bacterial, archaeal and eukaryotic diversity of smooth and pustular microbial mat communities in the hypersaline lagoon of Shark Bay.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Spatial and temporal variability in a stratified hypersaline microbial mat community.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP) for microbiome studies: bacterial diversity in the ileum of newly weaned Salmonella-infected pigs

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Candidatus Chloracidobacterium thermophilum: an aerobic phototrophic Acidobacterium

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Biophysical controls on community succession in stream biofilms.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Biogeographical distribution and ecological ranges of benthic cyanobacteria in East Antarctic lakes

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Unexpected diversity and complexity of the Guerrero Negro hypersaline microbial mat

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

UniFrac: a new phylogenetic method for comparing microbial communities

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Diversity within cyanobacterial mat communities in variable salinity meltwater ponds of McMurdo Ice Shelf, Antarctica

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Adaptive divergence in pigment composition promotes phytoplankton biodiversity.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

16S rDNA diversity of cultured and uncultured prokaryotes of a mat sample from Lake Fryxell, McMurdo Dry Valleys, Antarctica

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Microbial biofilms: from ecology to molecular genetics

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Global patterns in biodiversity

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

A comparison of methods for total community DNA preservation and extraction from various thermal environments

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

Mechanisms of Maintenance of Species Diversity

23 September 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW148

Community structure and physiological characterization of microbial mats in Byers Peninsula, Livingston Island (South Shetland Islands, Antarctica)

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5975864

The Functional Significance of the Hyporheic Zone in Streams and Rivers

21 October 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW148

Metagenomic profiling of Arctic microbial mat communities as nutrient scavenging and recycling systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW148

Stream biogeochemical and suspended sediment responses to permafrost degradation in stream banks in Taylor Valley, Antarctica

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW148

Cyanobacterial Dominance in the Polar Regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW148

Antarctic stream ecosystems: physiological ecology of a blue-green algal epilithon

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW148

Life in the Main Channel: Long-Term Hydrologic Control of Microbial Mat Abundance in McMurdo Dry Valley Streams, Antarctica

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW148

Reactivation of a cryptobiotic stream ecosystem in the McMurdo Dry Valleys, Antarctica: A long-term geomorphological experiment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSEC%2FFIW148

21 January 2018

Identifiers

DOI

10.1093/FEMSEC/FIW148

1 reference

15 June 2018

PMC publication ID

5975864

1 reference

15 June 2018

PubMed publication ID

27495241

1 reference

15 June 2018