Silence of the genes--mechanisms of long-term repression (Q36191962)

12 August 2017

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title

Silence of the genes--mechanisms of long-term repression (English)

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12 August 2017

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Laura Lande-Diner

1

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12 August 2017

Howard Cedar

series ordinal

2

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12 August 2017

publication date

1 August 2005

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12 August 2017

published in

Nature Reviews Genetics

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12 August 2017

volume

6

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12 August 2017

issue

8

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12 August 2017

page(s)

648-654

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Oct-4 transcription factor is differentially expressed in the mouse embryo during establishment of the first two extraembryonic cell lineages involved in implantation

12 August 2017

cites work

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Gene number, noise reduction and biological complexity

21 January 2018

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RNAi-mediated pathways in the nucleus

21 January 2018

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Identification of potential target genes for the neuron-restrictive silencer factor

21 January 2018

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NRSF/REST is required in vivo for repression of multiple neuronal target genes during embryogenesis

21 January 2018

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The neuron-restrictive silencer factor (NRSF): a coordinate repressor of multiple neuron-specific genes

21 January 2018

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Polycomb complexes and silencing mechanisms.

21 January 2018

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Demethylation of CpG islands in embryonic cells

21 January 2018

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Sp1 elements protect a CpG island from de novo methylation

21 January 2018

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DNA methylation represses transcription in vivo.

21 January 2018

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Eucaryotic DNA: organization of the genome for replication

21 January 2018

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21 January 2018

Replicating by the clock

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Replication timing of genes and middle repetitive sequences

21 January 2018

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Clustering of housekeeping genes provides a unified model of gene order in the human genome

21 January 2018

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Multiple origins of replication in the dihydrofolate reductase amplicons of a methotrexate-resistant chinese hamster cell line

21 January 2018

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Developmental regulation of DNA replication timing at the human beta globin locus.

21 January 2018

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Long-distance control of origin choice and replication timing in the human beta-globin locus are independent of the locus control region

21 January 2018

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Autoradiography of chromosomal DNA fibers from Chinese hamster cells

21 January 2018

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Establishment of transcriptional competence in early and late S phase

21 January 2018

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Translating the Histone Code

21 January 2018

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Common themes in mechanisms of gene silencing

21 January 2018

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Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex

21 January 2018

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Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription

21 January 2018

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Histone H3 lysine 9 methylation is an epigenetic imprint of facultative heterochromatin.

21 January 2018

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Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains

21 January 2018

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Regulation of chromatin structure by site-specific histone H3 methyltransferases

21 January 2018

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Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

21 January 2018

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Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

21 January 2018

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Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly

21 January 2018

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Localized domains of G9a-mediated histone methylation are required for silencing of neuronal genes

21 January 2018

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Asynchronous replication timing of imprinted loci is independent of DNA methylation, but consistent with differential subnuclear localization

21 January 2018

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CpG-rich islands and the function of DNA methylation

21 January 2018

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Loss of genomic methylation causes p53-dependent apoptosis and epigenetic deregulation

21 January 2018

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A unique developmental pattern of Oct-3/4 DNA methylation is controlled by a cis-demodification element

21 January 2018

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Recent advances in X-chromosome inactivation

21 January 2018

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Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin

21 January 2018

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Replication timing and transcriptional control: beyond cause and effect

21 January 2018

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Targeting of Ikaros to pericentromeric heterochromatin by direct DNA binding

21 January 2018

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Transcriptional repression by REST: recruitment of Sin3A and histone deacetylase to neuronal genes

21 January 2018

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Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression

21 January 2018

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Cyclin A repression in quiescent cells is associated with chromatin remodeling of its promoter and requires Brahma/SNF2alpha

21 January 2018

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p53 represses RNA polymerase III transcription by targeting TBP and inhibiting promoter occupancy by TFIIIB.

21 January 2018

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Effects of DNA methylation on DNA-binding proteins and gene expression.

21 January 2018

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The role of DNA methylation in setting up chromatin structure during development

21 January 2018

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DNA methylation affects the formation of active chromatin

21 January 2018

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Synthesis of globin ribonucleic acid from duck-reticulocyte chromatin in vitro

21 January 2018

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Chromosomal subunits in active genes have an altered conformation

21 January 2018

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RAG-1 and RAG-2, adjacent genes that synergistically activate V(D)J recombination

21 January 2018

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DNA methylation stabilizes X chromosome inactivation in eutherians but not in marsupials: evidence for multistep maintenance of mammalian X dosage compensation

21 January 2018

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21 January 2018

Chromatin goes global

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Clonal selection and learning in the antibody system

21 January 2018

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A stepwise epigenetic process controls immunoglobulin allelic exclusion

21 January 2018

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Monoallelic gene expression: a repertoire of recurrent themes

21 January 2018

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Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development

21 January 2018

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Biallelic germline transcription at the kappa immunoglobulin locus

21 January 2018

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V(D)J recombination is not activated by demethylation of the kappa locus

21 January 2018

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A multistep mechanism for the activation of rearrangement in the immune system

21 January 2018

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Nuclear position leaves its mark on replication timing

21 January 2018

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The replication timing program of the Chinese hamster beta-globin locus is established coincident with its repositioning near peripheral heterochromatin in early G1 phase

21 January 2018

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Activation and repression of a beta-globin gene in cell hybrids is accompanied by a shift in its temporal replication

21 January 2018

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A developmentally stable chromatin structure in the human beta-globin gene cluster

21 January 2018

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Human fetal to adult hemoglobin switching: changes in chromatin structure of the beta-globin gene locus

21 January 2018

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How mammalian transcriptional repressors work

21 January 2018

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Association of transcriptionally silent genes with Ikaros complexes at centromeric heterochromatin

21 January 2018

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Corepressor-dependent silencing of chromosomal regions encoding neuronal genes

21 January 2018

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Regulation of V(D)J recombination by nucleosome positioning at recombination signal sequences

21 January 2018

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Occupancy and synergistic activation of the FMR1 promoter by Nrf-1 and Sp1 in vivo

21 January 2018

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Advances in understanding of fragile X pathogenesis and FMRP function, and in identification of X linked mental retardation genes.

21 January 2018

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Methylation-induced repression--belts, braces, and chromatin

21 January 2018

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DNA methylation models histone acetylation

21 January 2018

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Distribution of 5-methylcytosine in chromatin

21 January 2018

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DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci

21 January 2018

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21 January 2018

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Asynchronous replication and allelic exclusion in the immune system

21 January 2018

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Sequence specificity of methylation in higher plant DNA

21 January 2018

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Developmental pattern of gene-specific DNA methylation in the mouse embryo and germ line

21 January 2018

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Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island

31 March 2020

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Substrate and sequence specificity of a eukaryotic DNA methylase

31 March 2020

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Assembly of transcriptionally active 5S RNA gene chromatin in vitro

31 March 2020

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Assembly of an active chromatin structure during replication

31 March 2020

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Gene repression paradigms in animal cells

31 March 2020

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A fraction of the mouse genome that is derived from islands of nonmethylated, CpG-rich DNA

31 March 2020

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Transcriptional regulation of immunoglobulin V genes

31 March 2020

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Transcription of chromatin in vitro

31 March 2020

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Nuclease sensitivity of active chromatin

31 March 2020

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Reactivation of an inactive human X chromosome: evidence for X inactivation by DNA methylation

31 March 2020

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Kappa chain monoallelic demethylation and the establishment of allelic exclusion

31 March 2020

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Histone acetylation and hSWI/SNF remodeling act in concert to stimulate V(D)J cleavage of nucleosomal DNA

31 March 2020

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A strain-specific modifier on mouse chromosome 4 controls the methylation of independent transgene loci

31 March 2020

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DNA methylation and the regulation of globin gene expression

31 March 2020

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Helios, a T cell-restricted Ikaros family member that quantitatively associates with Ikaros at centromeric heterochromatin

31 March 2020

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Chromatin compaction by a polycomb group protein complex

31 March 2020

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Variable FMR1 gene methylation of large expansions leads to variable phenotype in three males from one fragile X family

31 March 2020

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No mental retardation in a man with 40% abnormal methylation at the FMR-1 locus and transmission of sperm cell mutations as premutations.

31 March 2020

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Normal phenotype in two brothers with a full FMR1 mutation.

31 March 2020

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Methylation of CpG sequences in eukaryotic DNA

31 March 2020

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Mapping of DNAase I sensitive regions on mitotic chromosomes

31 March 2020

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31 March 2020

Identifiers

DOI

10.1038/NRG1639

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Dimensions Publication ID

12 August 2017

1028882140

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Fatcat ID

release_d45eoq7kpfa4nn44hvnong2vza

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Fatcat

https://api.fatcat.wiki/v0/release/d45eoq7kpfa4nn44hvnong2vza

mapped directly with Wikidata item

24 November 2022

based on heuristic

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