Altered promoter nucleosome positioning is an early event in gene silencing (Q36214497)

12 August 2017

Altered promoter nucleosome positioning is an early event in gene silencing (English)

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12 August 2017

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9

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12 August 2017

Nicholas J Hawkins

7

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Benedict Shien Wei Ng

6

object named as

Benedict Ng

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12 August 2017

Luke B Hesson

1

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12 August 2017

Mathew A Sloane

2

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12 August 2017

Jason Wh Wong

3

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12 August 2017

Andrea C Nunez

4

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12 August 2017

Sameer Srivastava

5

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12 August 2017

Michael J Bourke

8

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12 August 2017

1 October 2014

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12 August 2017

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12 August 2017

9

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12 August 2017

10

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12 August 2017

1422-1430

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Reconfiguration of nucleosome-depleted regions at distal regulatory elements accompanies DNA methylation of enhancers and insulators in cancer

12 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Reassembly of nucleosomes at the MLH1 promoter initiates resilencing following decitabine exposure

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Genomic aberrations occurring in subsets of serrated colorectal lesions but not conventional adenomas

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Polycomb-repressed genes have permissive enhancers that initiate reprogramming

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

OCT4 establishes and maintains nucleosome-depleted regions that provide additional layers of epigenetic regulation of its target genes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Determinants of nucleosome organization in primary human cells

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Transcriptionally repressed genes become aberrantly methylated and distinguish tumors of different lineages in breast cancer.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

H2A.Z Maintenance during Mitosis Reveals Nucleosome Shifting on Mitotically Silenced Genes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Hypomethylation of a LINE-1 promoter activates an alternate transcript of the MET oncogene in bladders with cancer

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

A scaling normalization method for differential expression analysis of RNA-seq data

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Fast and accurate short read alignment with Burrows-Wheeler transform

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

TopHat: discovering splice junctions with RNA-Seq

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Nucleosome positioning and gene regulation: advances through genomics

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Activator control of nucleosome occupancy in activation and repression of transcription

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Dynamic regulation of nucleosome positioning in the human genome

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Role of nucleosomal occupancy in the epigenetic silencing of the MLH1 CpG island.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Evidence for an instructive mechanism of de novo methylation in cancer cells.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Unanswered Questions about the Role of Promoter Methylation in Carcinogenesis

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Nucleosomes and the accessibility problem

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4622968

Establishing the clinical utility of epigenetic markers in cancer: many challenges ahead

29 June 2018

1 reference

https://api.crossref.org/works/10.4161%2F15592294.2014.970077

Regulation of a mammalian gene bearing a CpG island promoter and a distal enhancer

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2F15592294.2014.970077

Evidence for nucleosome depletion at active regulatory regions genome-wide

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2F15592294.2014.970077

Discrimination of Pseudogene and Parental Gene DNA Methylation Using Allelic Bisulfite Sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2F15592294.2014.970077

DNA Methylation and Cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2F15592294.2014.970077

10.4161/15592294.2014.970077

21 January 2018

Identifiers

DOI

1 reference

12 August 2017

1 reference

12 August 2017

PubMed publication ID

25437056

1 reference