Proteogenomics of synaptosomal mitochondrial oxidative stress (Q36215789)

12 August 2017

Proteogenomics of synaptosomal mitochondrial oxidative stress (English)

1 reference

12 August 2017

James M Flynn

1

1 reference

12 August 2017

Gregg A Czerwieniec

2

1 reference

12 August 2017

Sung W Choi

3

1 reference

12 August 2017

Nicholas U Day

4

1 reference

12 August 2017

Bradford W Gibson

5

1 reference

12 August 2017

Alan Hubbard

6

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12 August 2017

Simon Melov

7

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12 August 2017

13 July 2012

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Free Radical Biology and Medicine

12 August 2017

1 reference

12 August 2017

53

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12 August 2017

5

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12 August 2017

1048-1060

1 reference

describes a project that uses

12 August 2017

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/3436120

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Identification of a cis-acting element that localizes mRNA to synapses

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Dendritic mRNA targeting and translation

1 October 2017

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Altered expression of synapse and glutamate related genes in post-mortem hippocampus of depressed subjects

1 October 2017

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Regulatory control or oxidative damage? Proteomic approaches to interrogate the role of cysteine oxidation status in biological processes.

1 October 2017

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Local RNA translation at the synapse and in disease

1 October 2017

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From synapse to nucleus and back again--communication over distance within neurons

1 October 2017

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Protein carbonylation and metal-catalyzed protein oxidation in a cellular perspective

1 October 2017

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Making and breaking synapses through local mRNA regulation

1 October 2017

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Intrinsic bioenergetic properties and stress sensitivity of dopaminergic synaptosomes

1 October 2017

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Synapse-to-nucleus signaling

1 October 2017

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Impaired spare respiratory capacity in cortical synaptosomes from Sod2 null mice

1 October 2017

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High-mobility group box 1, oxidative stress, and disease

1 October 2017

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RNA granules: the good, the bad and the ugly

1 October 2017

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Protein homeostasis and synaptic plasticity

1 October 2017

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Human iron-sulfur cluster assembly, cellular iron homeostasis, and disease

1 October 2017

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Spatially restricting gene expression by local translation at synapses

1 October 2017

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HMGB1 and RAGE in inflammation and cancer

1 October 2017

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Synaptic proteome changes in the superior frontal gyrus and occipital cortex of the alcoholic brain

1 October 2017

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Neuroscience in the era of functional genomics and systems biology

1 October 2017

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Role of protein tyrosine nitration in neurodegenerative diseases and atherosclerosis

1 October 2017

1 reference

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Synaptic proteins linked to HIV-1 infection and immunoproteasome induction: proteomic analysis of human synaptosomes

1 October 2017

1 reference

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Transcriptome analysis of synaptoneurosomes identifies neuroplasticity genes overexpressed in incipient Alzheimer's disease

1 October 2017

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The proteome of the presynaptic active zone: from docked synaptic vesicles to adhesion molecules and maxi-channels

1 October 2017

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

1 October 2017

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Oxidative stress and energy crises in neuronal dysfunction

1 October 2017

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Communication between the synapse and the nucleus in neuronal development, plasticity, and disease

1 October 2017

1 reference

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Stress granules: the Tao of RNA triage

1 October 2017

1 reference

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Interlocking transcriptomics, proteomics and toponomics technologies for brain tissue analysis in murine hippocampus

1 October 2017

1 reference

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1 October 2017

Synaptosome proteomics

1 reference

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Increased production of inflammatory cytokines in mild cognitive impairment

1 October 2017

1 reference

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 October 2017

1 reference

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Role of HMGB1 in cardiovascular diseases

1 October 2017

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Iron-sulphur clusters and the problem with oxygen

1 October 2017

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Synaptic changes in Alzheimer's disease: increased amyloid-beta and gliosis in surviving terminals is accompanied by decreased PSD-95 fluorescence

1 October 2017

1 reference

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Bioconductor: open software development for computational biology and bioinformatics

1 October 2017

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Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents

1 October 2017

1 reference

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Synaptic pathology in Alzheimer's disease: a review of ultrastructural studies

1 October 2017

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Bioenergetics and transmitter release in the isolated nerve terminal

1 October 2017

1 reference

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Alzheimer's disease is a synaptic failure

1 October 2017

1 reference

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Mitochondrial disease in superoxide dismutase 2 mutant mice

1 October 2017

1 reference

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A novel neurological phenotype in mice lacking mitochondrial manganese superoxide dismutase

1 October 2017

1 reference

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The glutamatergic nerve terminal

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Thirty years of synaptosome research

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Dilated cardiomyopathy and neonatal lethality in mutant mice lacking manganese superoxide dismutase

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

The synaptic proteome during development and plasticity of the mouse visual cortex

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Bioenergetic analysis of isolated cerebrocortical nerve terminals on a microgram scale: spare respiratory capacity and stochastic mitochondrial failure

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Peripheral cytokines profile in Parkinson's disease.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Ketone bodies are protective against oxidative stress in neocortical neurons

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Ketones inhibit mitochondrial production of reactive oxygen species production following glutamate excitotoxicity by increasing NADH oxidation

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Lifespan extension and rescue of spongiform encephalopathy in superoxide dismutase 2 nullizygous mice treated with superoxide dismutase-catalase mimetics.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Synaptosomes possess an exocytotic pool of glutamate.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Profiling of mouse synaptosome proteome and phosphoproteome by IEF.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Comparison of a protein-level and peptide-level labeling strategy for quantitative proteomics of synaptosomes using isobaric tags

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

A rapid Percoll gradient procedure for preparation of synaptosomes.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Induction of ketosis may improve mitochondrial function and decrease steady-state amyloid-beta precursor protein (APP) levels in the aged dog.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Systemic immune aberrations in Alzheimer's disease patients.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Proteomic analysis of rat striatal synaptosomes during acrylamide intoxication at a low dose rate

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Dendritic pathology in prion disease starts at the synaptic spine.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Proteomic and functional alterations in brain mitochondria from Tg2576 mice occur before amyloid plaque deposition.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Mitochondrial reactive oxygen species in mice lacking superoxide dismutase 2: attenuation via antioxidant treatment

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Proteomic analysis of synaptosomes using isotope-coded affinity tags and mass spectrometry.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Pharmacogenomic profiling of an oxidative stress-mediated spongiform encephalopathy

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Neuroscience. Making synapses: a balancing act.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Endogenous mitochondrial oxidative stress: neurodegeneration, proteomic analysis, specific respiratory chain defects, and efficacious antioxidant therapy in superoxide dismutase 2 null mice

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

Which synapses are affected in aging and what is the nature of their vulnerability? A commentary on "life span and synapses: will there be a primary senile dementia?".

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3436120

10.1016/J.FREERADBIOMED.2012.07.004

22 September 2018

Identifiers

DOI

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12 August 2017

1 reference

12 August 2017

1 reference