Smchd1-dependent and -independent pathways determine developmental dynamics of CpG island methylation on the inactive X chromosome. (Q36220166)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22841499%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

title

Smchd1-dependent and -independent pathways determine developmental dynamics of CpG island methylation on the inactive X chromosome (English)

1 reference

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9 February 2020

1 reference

13

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9 February 2020

Anne-Valerie Gendrel

1

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9 February 2020

Amy Y Tang

7

1 reference

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9 February 2020

Eleni Giannoulatou

11

1 reference

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9 February 2020

Neil Brockdorff

14

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9 February 2020

12

Edith Heard

1 reference

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9 February 2020

author name string

Anwyn Apedaile

2

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9 February 2020

Heather Coker

3

1 reference

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9 February 2020

Ausma Termanis

4

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9 February 2020

Ilona Zvetkova

5

1 reference

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9 February 2020

Jonathan Godwin

6

1 reference

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9 February 2020

Derek Huntley

8

1 reference

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9 February 2020

Giovanni Montana

9

1 reference

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9 February 2020

Steven Taylor

10

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9 February 2020

language of work or name

English

0 references

publication date

26 July 2012

1 reference

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9 February 2020

number of pages

15

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inferred from page(s)

published in

Developmental Cell

1 reference

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9 February 2020

volume

23

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9 February 2020

issue

2

1 reference

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9 February 2020

page(s)

265-279

1 reference

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A unique regulatory phase of DNA methylation in the early mammalian embryo

9 February 2020

cites work

1 reference

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1 October 2017

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1 October 2017

1 reference

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Orphan CpG islands identify numerous conserved promoters in the mammalian genome

1 October 2017

1 reference

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LINE-1 activity in facultative heterochromatin formation during X chromosome inactivation

1 October 2017

1 reference

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CpG islands recruit a histone H3 lysine 36 demethylase

1 October 2017

1 reference

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CpG islands influence chromatin structure via the CpG-binding protein Cfp1.

1 October 2017

1 reference

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Global survey of escape from X inactivation by RNA-sequencing in mouse

1 October 2017

1 reference

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Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state.

1 October 2017

1 reference

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The Trithorax group protein Ash2l and Saf-A are recruited to the inactive X chromosome at the onset of stable X inactivation

1 October 2017

1 reference

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Xist gene regulation at the onset of X inactivation

1 October 2017

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 October 2017

1 reference

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SmcHD1, containing a structural-maintenance-of-chromosomes hinge domain, has a critical role in X inactivation

1 October 2017

1 reference

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A novel CpG island set identifies tissue-specific methylation at developmental gene loci

1 October 2017

1 reference

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Dosage compensation in the mouse balances up-regulation and silencing of X-linked genes

1 October 2017

1 reference

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Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation

1 October 2017

1 reference

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DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA

1 October 2017

1 reference

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Mechanisms regulating imprinted genes in clusters.

1 October 2017

1 reference

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Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

1 October 2017

1 reference

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Gene body-specific methylation on the active X chromosome

1 October 2017

1 reference

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A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing

1 October 2017

1 reference

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Epigenetic stem cell signature in cancer

1 October 2017

1 reference

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Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer

1 October 2017

1 reference

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DNA methylation regulates long-range gene silencing of an X-linked homeobox gene cluster in a lineage-specific manner

1 October 2017

1 reference

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CpG island methylation in human lymphocytes is highly correlated with DNA sequence, repeats, and predicted DNA structure

1 October 2017

1 reference

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Quantitative high-throughput analysis of DNA methylation patterns by base-specific cleavage and mass spectrometry

1 October 2017

1 reference

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Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

1 October 2017

1 reference

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An N-ethyl-N-nitrosourea screen for genes involved in variegation in the mouse

1 October 2017

1 reference

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Biochemistry and biology of mammalian DNA methyltransferases

1 October 2017

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Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation

1 October 2017

1 reference

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Epigenomics: beyond CpG islands.

1 October 2017

1 reference

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Heterochromatin on the inactive X chromosome delays replication timing without affecting origin usage

1 October 2017

1 reference

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X-chromosome inactivation in mouse embryonic stem cells: analysis of histone modifications and transcriptional activity using immunofluorescence and FISH.

1 October 2017

1 reference

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Role of histone H3 lysine 27 methylation in X inactivation

1 October 2017

1 reference

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The generic genome browser: a building block for a model organism system database

1 October 2017

1 reference

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Mitotically stable association of polycomb group proteins eed and enx1 with the inactive x chromosome in trophoblast stem cells

1 October 2017

1 reference

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A genome-wide screen for normally methylated human CpG islands that can identify novel imprinted genes

1 October 2017

1 reference

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DNA methylation patterns and epigenetic memory

1 October 2017

1 reference

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Histone macroH2A1.2 relocates to the inactive X chromosome after initiation and propagation of X-inactivation.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Methylation-induced repression--belts, braces, and chromatin

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

The DNMT3B DNA methyltransferase gene is mutated in the ICF immunodeficiency syndrome

1 October 2017

1 reference

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DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

1 October 2017

1 reference

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Transcription of IAP endogenous retroviruses is constrained by cytosine methylation

1 October 2017

1 reference

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X-Inactivation and histone H4 acetylation in embryonic stem cells

1 October 2017

1 reference

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Multiple roles for DNA methylation in gametic imprinting

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island

1 October 2017

1 reference

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Asymmetrical distribution of CpG in an 'average' mammalian gene

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Inactive X chromosome has the highest concentration of unmethylated Hha I sites

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Methylation of the mouse hprt gene differs on the active and inactive X chromosomes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

De novo methylation of the MyoD1 CpG island during the establishment of immortal cell lines

1 October 2017

1 reference

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High levels of de novo methylation and altered chromatin structure at CpG islands in cell lines.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Methylation status of CpG-rich islands on active and inactive mouse X chromosomes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Use of a HpaII-polymerase chain reaction assay to study DNA methylation in the Pgk-1 CpG island of mouse embryos at the time of X-chromosome inactivation

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Global hypomethylation of the genome in XX embryonic stem cells.

29 June 2018

1 reference

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Dnmt3a and Dnmt3b are transcriptional repressors that exhibit unique localization properties to heterochromatin

29 June 2018

1 reference

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Sp1 elements protect a CpG island from de novo methylation

29 June 2018

1 reference

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Methylation of CpG sites of two X-linked genes coincides with X-inactivation in the female mouse embryo but not in the germ line

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Targets and dynamics of promoter DNA methylation during early mouse development.

29 June 2018

1 reference

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Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors.

22 September 2018

1 reference

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Overall DNA methylation and chromatin structure of normal and abnormal X chromosomes.

22 September 2018

1 reference

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Establishment of histone h3 methylation on the inactive X chromosome requires transient recruitment of Eed-Enx1 polycomb group complexes

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Escape from gene silencing in ICF syndrome: evidence for advanced replication time as a major determinant.

22 September 2018

1 reference

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A Genome-Wide Screen for Normally Methylated Human CpG Islands That Can Identify Novel Imprinted Genes

22 September 2018

1 reference

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X Inactivation in the Mouse Embryo Deficient for Dnmt1: Distinct Effect of Hypomethylation on Imprinted and Random X Inactivation

5 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3437444

Common methylation characteristics of sex chromosomes in somatic and germ cells from mouse, lemur and human

5 December 2018

1 reference

12 December 2020

Isolation of CpG islands using a methyl-CpG binding column

1 reference

12 December 2020

A fraction of the mouse genome that is derived from islands of nonmethylated, CpG-rich DNA

1 reference

12 December 2020

Methylation of the Hprt gene on the inactive X occurs after chromosome inactivation

1 reference

12 December 2020

Methylation of the oestrogen receptor CpG island links ageing and neoplasia in human colon

1 reference

12 December 2020

10.1016/J.DEVCEL.2012.06.011

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22841499%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

1 reference

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9 February 2020

1 reference

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