Transfer-messenger RNA-SmpB protein regulates ribonuclease R turnover by promoting binding of HslUV and Lon proteases (Q36286137)

13 August 2017

Transfer-messenger RNA-SmpB protein regulates ribonuclease R turnover by promoting binding of HslUV and Lon proteases (English)

1 reference

13 August 2017

Wenxing Liang

1

1 reference

13 August 2017

Murray P Deutscher

series ordinal

2

1 reference

13 August 2017

language of work or name

English

0 references

publication date

9 August 2012

1 reference

Journal of Biological Chemistry

13 August 2017

1 reference

13 August 2017

287

1 reference

13 August 2017

40

1 reference

13 August 2017

33472-33479

1 reference

Post-translational modification of RNase R is regulated by stress-dependent reduction in the acetylating enzyme Pka (YfiQ).

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Acetylation regulates the stability of a bacterial protein: growth stage-dependent modification of RNase R.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

A novel mechanism for ribonuclease regulation: transfer-messenger RNA (tmRNA) and its associated protein SmpB regulate the stability of RNase R.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

The bacterial N-end rule pathway: expect the unexpected

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

RNase R is a highly unstable protein regulated by growth phase and stress

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Insights into how RNase R degrades structured RNA: analysis of the nuclease domain

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Maturation and degradation of ribosomal RNA in bacteria

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

The role of 3'-5' exoribonucleases in RNA degradation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Endonucleolytic initiation of mRNA decay in Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

The roles of individual domains of RNase R in substrate binding and exoribonuclease activity. The nuclease domain is sufficient for digestion of structured RNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Trans-translation: the tmRNA-mediated surveillance mechanism for ribosome rescue, directed protein degradation, and nonstop mRNA decay

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

The N-end rule pathway for regulated proteolysis: prokaryotic and eukaryotic strategies

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Degradation of RNA in bacteria: comparison of mRNA and stable RNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Nucleotide-dependent substrate recognition by the AAA+ HslUV protease.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

An important role for RNase R in mRNA decay

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Proteolysis in Bacterial Regulatory Circuits

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Degradation of stable RNA in bacteria

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

A salvage pathway for protein structures: tmRNA and trans-translation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

The biological roles of trans-translation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Exoribonuclease superfamilies: structural analysis and phylogenetic distribution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

The SsrA-SmpB system for protein tagging, directed degradation and ribosome rescue

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Redundant in vivo proteolytic activities of Escherichia coli Lon and the ClpYQ (HslUV) protease.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Non‐stop mRNA decay initiates at the ribosome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3460448

Purification and characterization of the Escherichia coli exoribonuclease RNase R. Comparison with RNase II.

29 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

The vacB gene required for virulence in Shigella flexneri and Escherichia coli encodes the exoribonuclease RNase R.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

Substrate recognition and catalysis by the exoribonuclease RNase R.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

RNase R affects gene expression in stationary phase: regulation of ompA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

Elevation of RNase R in response to multiple stress conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

The Arabidopsis homologs of CCR4-associated factor 1 show mRNA deadenylation activity and play a role in plant defence responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

Studying tmRNA-mediated surveillance and nonstop mRNA decay

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

Detecting protein-protein interactions by Far western blotting

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

RNase R degrades non-stop mRNAs selectively in an SmpB-tmRNA-dependent manner.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.375287

21 January 2018

Identifiers

DOI

10.1074/JBC.M112.375287

1 reference

release_4noytx5wcrfhbnk2ohi4qmiryy

13 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/4noytx5wcrfhbnk2ohi4qmiryy

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

13 August 2017

PubMed publication ID

22879590

1 reference