Metagenomics: DNA sequencing of environmental samples. (Q36320425)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16304596%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

review article

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title

Metagenomics: DNA sequencing of environmental samples (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16304596%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

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1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16304596%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

author name string

Edward M Rubin

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16304596%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

publication date

1 November 2005

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16304596%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

published in

Nature Reviews Genetics

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16304596%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

volume

6

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9 January 2020

page(s)

805-814

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16304596%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

issue

11

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https://scigraph.springernature.com/pub.10.1038/nrg1709

9 January 2020

exact match

0 references

cites work

Comparative genomics at the vertebrate extremes

1 reference

Advanced sequencing technologies: methods and goals

31 March 2020

1 reference

Environmental genome shotgun sequencing of the Sargasso Sea

31 March 2020

1 reference

Genomic analysis of uncultured marine viral communities

31 March 2020

1 reference

Evaluation of extraction and purification methods for obtaining PCR-amplifiable DNA from compost for microbial community analysis

31 March 2020

1 reference

Ancient DNA analysis of human populations

31 March 2020

1 reference

Metagenomic analyses of an uncultured viral community from human feces

31 March 2020

1 reference

A Census of rRNA Genes and Linked Genomic Sequences within a Soil Metagenomic Library

31 March 2020

1 reference

Characterization of uncultivated prokaryotes: isolation and analysis of a 40-kilobase-pair genome fragment from a planktonic marine archaeon

31 March 2020

1 reference

Isolation of high molecular weight DNA from soil for cloning into BAC vectors.

31 March 2020

1 reference

Phylogenetic analysis of ribosomal RNA operons from uncultivated coastal marine bacterioplankton

31 March 2020

1 reference

Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing

31 March 2020

1 reference

Bacterial rhodopsin: evidence for a new type of phototrophy in the sea

31 March 2020

1 reference

Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces

31 March 2020

1 reference

Comparative analysis of a genome fragment of an uncultivated mesopelagic crenarchaeote reveals multiple horizontal gene transfers

31 March 2020

1 reference

First insight into the genome of an uncultivated crenarchaeote from soil

31 March 2020

1 reference

Acidobacteria form a coherent but highly diverse group within the bacterial domain: evidence from environmental genomics.

31 March 2020

1 reference

Complete Genome Sequence of Treponema pallidum, the Syphilis Spirochete

31 March 2020

1 reference

The genome sequence of Rickettsia prowazekii and the origin of mitochondria

31 March 2020

1 reference

Massive gene decay in the leprosy bacillus

31 March 2020

1 reference

Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei

31 March 2020

1 reference

Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS

31 March 2020

1 reference

50 Million Years of Genomic Stasis in Endosymbiotic Bacteria

31 March 2020

1 reference

Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia

31 March 2020

1 reference

The genome sequence of Blochmannia floridanus: comparative analysis of reduced genomes

31 March 2020

1 reference

Reductive genome evolution in Buchnera aphidicola

31 March 2020

1 reference

Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements

31 March 2020

1 reference

Serendipitous discovery of Wolbachia genomes in multiple Drosophila species

31 March 2020

1 reference

The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode

31 March 2020

1 reference

Reductive evolution suggested from the complete genome sequence of a plant-pathogenic phytoplasma

31 March 2020

1 reference

New tests for syphilis: rational design of a PCR method for detection of Treponema pallidum in clinical specimens using unique regions of the DNA polymerase I gene

31 March 2020

1 reference

Genome-based design of a cell-free culture medium for Tropheryma whipplei.

31 March 2020

1 reference

Molecular genetic methods for the diagnosis of fastidious microorganisms

31 March 2020

1 reference

Metagrowth: a new resource for the building of metabolic hypotheses in microbiology

31 March 2020

1 reference

Genomics-based design of defined growth media for the plant pathogen Xylella fastidiosa

31 March 2020

1 reference

31 March 2020

1 reference

Complete mitochondrial genome sequences of two extinct moas clarify ratite evolution

31 March 2020

1 reference

Evidence for reproductive isolation between cave bear populations.

31 March 2020

1 reference

Nuclear gene sequences from a late pleistocene sloth coprolite

31 March 2020

1 reference

Nuclear DNA sequences from late Pleistocene megafauna

31 March 2020

1 reference

Genomic sequencing of Pleistocene cave bears

31 March 2020

1 reference

The dog genome: survey sequencing and comparative analysis.

31 March 2020

1 reference

Community structure and metabolism through reconstruction of microbial genomes from the environment

31 March 2020

1 reference

The microbiology of acidic mine waters

31 March 2020

1 reference

Phosphate depletion in the western North Atlantic Ocean

31 March 2020

1 reference

Alternative oxidase and plastoquinol terminal oxidase in marine prokaryotes of the Sargasso Sea

31 March 2020

1 reference

Different SAR86 subgroups harbour divergent proteorhodopsins

31 March 2020

1 reference

Miraculous catch of iron-sulfur protein sequences in the Sargasso Sea.

31 March 2020

1 reference

Chitinase gene sequences retrieved from diverse aquatic habitats reveal environment-specific distributions

31 March 2020

1 reference

Comparative metagenomics of microbial communities

31 March 2020

1 reference

Archaeal dominance in the mesopelagic zone of the Pacific Ocean

31 March 2020

1 reference

Endosymbiotic sulphate-reducing and sulphide-oxidizing bacteria in an oligochaete worm

31 March 2020

1 reference

The meaning and impact of the human genome sequence for microbiology

31 March 2020

1 reference

Reverse methanogenesis: testing the hypothesis with environmental genomics

31 March 2020

1 reference

The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism

31 March 2020

1 reference

PCR-mediated whole genome amplification of phytoplasmas.

31 March 2020

1 reference

Stable isotope probing - linking microbial identity to function

31 March 2020

1 reference

A new approach to determine the genetic diversity of viable and active bacteria in aquatic ecosystems

31 March 2020

1 reference

New method to characterize microbial diversity using flow cytometry.

31 March 2020

1 reference

In situ and non-invasive detection of specific bacterial species in oral biofilms using fluorescently labeled monoclonal antibodies

31 March 2020

1 reference

Flow sorting of marine bacterioplankton after fluorescence in situ hybridization

31 March 2020

1 reference

Affinity capture using vancomycin-bound magnetic nanoparticles for the MALDI-MS analysis of bacteria

31 March 2020

1 reference

Lectin and carbohydrate affinity capture surfaces for mass spectrometric analysis of microorganisms

31 March 2020

1 reference

Whole genome amplification--applications and advances

31 March 2020

1 reference

Diversity of oxygenase genes from methane- and ammonia-oxidizing bacteria in the Eastern Snake River Plain aquifer

31 March 2020

1 reference

Isothermal strand-displacement amplification applications for high-throughput genomics

31 March 2020

1 reference

Improved efficacy of whole genome amplification from bacterial cells.

31 March 2020

1 reference

Genome sequencing in microfabricated high-density picolitre reactors

31 March 2020

1 reference

Microbial community genomics in the ocean

31 March 2020

1 reference

The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

31 March 2020

1 reference

The Genome Sequence of the Malaria Mosquito Anopheles gambiae

31 March 2020

1 reference

Community genomics in microbial ecology and evolution

31 March 2020

1 reference

The closest BLAST hit is often not the nearest neighbor.

31 March 2020

1 reference

TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences

31 March 2020

1 reference

Development of joint application strategies for two microbial gene finders.

31 March 2020

1 reference

The ERGO genome analysis and discovery system

31 March 2020

1 reference

GenDB--an open source genome annotation system for prokaryote genomes

31 March 2020

1 reference

Enzyme-specific profiles for genome annotation: PRIAM

31 March 2020

1 reference

Genotypic diversity within a natural coastal bacterioplankton population.

31 March 2020

1 reference

Whole-genome sequence variation among multiple isolates of Pseudomonas aeruginosa

31 March 2020

1 reference

Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences.

31 March 2020

1 reference

Analysis of hydrothermal vent-associated symbionts by ribosomal RNA sequences

31 March 2020

1 reference

Genetic diversity in Sargasso Sea bacterioplankton

31 March 2020

1 reference

16S ribosomal DNA amplification for phylogenetic study

31 March 2020

1 reference

Molecular techniques for determining microbial diversity and community structure in natural environments

31 March 2020

1 reference

Simple, rapid method for direct isolation of nucleic acids from aquatic environments

31 March 2020

1 reference

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Characterization of a Yellowstone hot spring microbial community by 5S rRNA sequences

1 reference